| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is dut [H]
Identifier: 21227730
GI number: 21227730
Start: 1941048
End: 1941563
Strand: Reverse
Name: dut [H]
Synonym: MM_1628
Alternate gene names: 21227730
Gene position: 1941563-1941048 (Counterclockwise)
Preceding gene: 21227738
Following gene: 21227729
Centisome position: 47.4
GC content: 42.44
Gene sequence:
>516_bases ATGGCTCTTTTATCCAGCAATGAACTGAGAAAATTAATAAAAGCAAATCCCCCTTTACTTGAAAACGCAGTAGACACCGA AACCCAGATACAGCCAAATGGGCTTGAGCTCACCCTGAAAGAGATAAAAACAATAGAAGGTGCGGGAGCTGTTGATTTTG ACAATTCCGAAAGAAAAGTTCCGGACGCAAAACCCCTGGAATTTGGAAAAGACGGATGGATCCACCTTCCGGAGGGGATT TATAAAGTTATATTTAACGAAATCGTCAATATTCCAATGAACCTTGCTGCAATCGCAAAACCAAGATCAAGCCTTATTCG GTGCGGGGCAACTCTTGAAACTGCAGTATGGGATGCAGGTTACAGGGGACGAAGCGAATCCATGCTTGTAGTTTATAACC CTGCAGGCTTTAAGTTGAAGAAAAACGCCAGGATAATGCAGCTCCTTTTCTATACCCTTAATACCGAAGTAGAGGAAGGC TATTCTGGAGTTTACCAGAACGAAAATACAAACTGA
Upstream 100 bases:
>100_bases TAAGAAGAAAATAAAACAAAAAGAGAAACAAATATAAGAAAAGAATAAAGTTTGAAAAGCCCGAAATAGTAATAAAGAAT ACACACAATTACAGTTTTTC
Downstream 100 bases:
>100_bases ATTTATAAAAAATATGGAATAAAATAACTAAAATTGTAAAAGAATTTGAGGTAGAATGGACAGTGTAACATAAGTTCTGT AAAATCACAAATCTCAAGAA
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MALLSSNELRKLIKANPPLLENAVDTETQIQPNGLELTLKEIKTIEGAGAVDFDNSERKVPDAKPLEFGKDGWIHLPEGI YKVIFNEIVNIPMNLAAIAKPRSSLIRCGATLETAVWDAGYRGRSESMLVVYNPAGFKLKKNARIMQLLFYTLNTEVEEG YSGVYQNENTN
Sequences:
>Translated_171_residues MALLSSNELRKLIKANPPLLENAVDTETQIQPNGLELTLKEIKTIEGAGAVDFDNSERKVPDAKPLEFGKDGWIHLPEGI YKVIFNEIVNIPMNLAAIAKPRSSLIRCGATLETAVWDAGYRGRSESMLVVYNPAGFKLKKNARIMQLLFYTLNTEVEEG YSGVYQNENTN >Mature_170_residues ALLSSNELRKLIKANPPLLENAVDTETQIQPNGLELTLKEIKTIEGAGAVDFDNSERKVPDAKPLEFGKDGWIHLPEGIY KVIFNEIVNIPMNLAAIAKPRSSLIRCGATLETAVWDAGYRGRSESMLVVYNPAGFKLKKNARIMQLLFYTLNTEVEEGY SGVYQNENTN
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0717
COG function: function code F; Deoxycytidine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dCTP deaminase family. Archaeal dUTPase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 19028; Mature: 18897
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLSSNELRKLIKANPPLLENAVDTETQIQPNGLELTLKEIKTIEGAGAVDFDNSERKV CCCCCHHHHHHHHHCCCCHHHCCCCCCCEECCCCCEEEHHHHHHHCCCCCCCCCCCCCCC PDAKPLEFGKDGWIHLPEGIYKVIFNEIVNIPMNLAAIAKPRSSLIRCGATLETAVWDAG CCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCHHHHHHHCCC YRGRSESMLVVYNPAGFKLKKNARIMQLLFYTLNTEVEEGYSGVYQNENTN CCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC >Mature Secondary Structure ALLSSNELRKLIKANPPLLENAVDTETQIQPNGLELTLKEIKTIEGAGAVDFDNSERKV CCCCHHHHHHHHHCCCCHHHCCCCCCCEECCCCCEEEHHHHHHHCCCCCCCCCCCCCCC PDAKPLEFGKDGWIHLPEGIYKVIFNEIVNIPMNLAAIAKPRSSLIRCGATLETAVWDAG CCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCHHHHHHHCCC YRGRSESMLVVYNPAGFKLKKNARIMQLLFYTLNTEVEEGYSGVYQNENTN CCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]