Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227707

Identifier: 21227707

GI number: 21227707

Start: 1916206

End: 1916994

Strand: Direct

Name: 21227707

Synonym: MM_1605

Alternate gene names: NA

Gene position: 1916206-1916994 (Clockwise)

Preceding gene: 21227704

Following gene: 21227708

Centisome position: 46.78

GC content: 39.29

Gene sequence:

>789_bases
ATGAGTAACTCGCTTCTAGAATTGATTTTCCTCTCCGAAAAAAGGAAAAATCTTCTTTTATTTTTAAAAGAGGGGCCAAA
AAATATAGAAGAAATAAAAACAAATCTGGATACGAGCGCTGTAGCCATTCTTCCCCAGATTAAAAAATTAAGGGATGATT
CTCTGGTATTCAGGACAGAAGACTCTTACTTTCTGTCTCCTCTTGGCATAGCGGTAGCTGAGAGAATGCACGCGATGATG
CGTGTATTAAATGTCTTTTCCAGGAACTACGATTACTGGGCAGACCATGCAGTTGAGTGTTTGCCTTCTCCTTTAAAGAG
CAGGATTGGAGATCTGGAGAACTGTATCTTTTCCGAACCTCCTGACTGGACACACCTCTTTGAACCTCACAGGGAATTCG
TGGAAAAACTTACAGTATCGAGAAAGATAAAAGGAATTTCCGCCATCTTTTTTCCTCTTTACCCTTCCCTTTTCCTTTCT
TTTGCGAAAAATGGAGCAGATGTAACTCTTCTTGTGACCCTTCCGGTTTATGAGAGAATAAAAGGAGAATACAGGTCTGA
ATTAAGGGAATTTCTCAGCCTCGATAACACCTGTTTATATGTATGCGAGGAAAAAATAGAATTTTCTCATGTTGTCACTG
ATAAATTTCTCTCTTTGAGTCTTCCTTTTTCTAACGGCGCTTTTGACCATACGCGCGATGTCCTGTGTTTTGACCCTGTT
GCACTTAAATGGGGAGAAGACCTTTTTGCTTACTACAGGGATAGATCAGAAAAAATAAAGAAAGTATAA

Upstream 100 bases:

>100_bases
CATCCAAAAAAAATTTTCATATCTGGTTTCACGCTTTTGAATAAAAATAGTTGAATAATACGAAAGATACTTATCAAGTC
TTTACTTATCTCTTATAGAC

Downstream 100 bases:

>100_bases
CCAGATCAATTCCGGTCTTTGTCCTCCTCCGGTCTTTCAATGAGAGAAGGAGAGCTGAAAGATAGCTATAAATCAGGCGC
TGACTATCCCTTATATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSNSLLELIFLSEKRKNLLLFLKEGPKNIEEIKTNLDTSAVAILPQIKKLRDDSLVFRTEDSYFLSPLGIAVAERMHAMM
RVLNVFSRNYDYWADHAVECLPSPLKSRIGDLENCIFSEPPDWTHLFEPHREFVEKLTVSRKIKGISAIFFPLYPSLFLS
FAKNGADVTLLVTLPVYERIKGEYRSELREFLSLDNTCLYVCEEKIEFSHVVTDKFLSLSLPFSNGAFDHTRDVLCFDPV
ALKWGEDLFAYYRDRSEKIKKV

Sequences:

>Translated_262_residues
MSNSLLELIFLSEKRKNLLLFLKEGPKNIEEIKTNLDTSAVAILPQIKKLRDDSLVFRTEDSYFLSPLGIAVAERMHAMM
RVLNVFSRNYDYWADHAVECLPSPLKSRIGDLENCIFSEPPDWTHLFEPHREFVEKLTVSRKIKGISAIFFPLYPSLFLS
FAKNGADVTLLVTLPVYERIKGEYRSELREFLSLDNTCLYVCEEKIEFSHVVTDKFLSLSLPFSNGAFDHTRDVLCFDPV
ALKWGEDLFAYYRDRSEKIKKV
>Mature_261_residues
SNSLLELIFLSEKRKNLLLFLKEGPKNIEEIKTNLDTSAVAILPQIKKLRDDSLVFRTEDSYFLSPLGIAVAERMHAMMR
VLNVFSRNYDYWADHAVECLPSPLKSRIGDLENCIFSEPPDWTHLFEPHREFVEKLTVSRKIKGISAIFFPLYPSLFLSF
AKNGADVTLLVTLPVYERIKGEYRSELREFLSLDNTCLYVCEEKIEFSHVVTDKFLSLSLPFSNGAFDHTRDVLCFDPVA
LKWGEDLFAYYRDRSEKIKKV

Specific function: Unknown

COG id: COG4742

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30347; Mature: 30216

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLLELIFLSEKRKNLLLFLKEGPKNIEEIKTNLDTSAVAILPQIKKLRDDSLVFRTE
CCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEC
DSYFLSPLGIAVAERMHAMMRVLNVFSRNYDYWADHAVECLPSPLKSRIGDLENCIFSEP
CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHCHHHHHHCCCC
PDWTHLFEPHREFVEKLTVSRKIKGISAIFFPLYPSLFLSFAKNGADVTLLVTLPVYERI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH
KGEYRSELREFLSLDNTCLYVCEEKIEFSHVVTDKFLSLSLPFSNGAFDHTRDVLCFDPV
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCH
ALKWGEDLFAYYRDRSEKIKKV
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNSLLELIFLSEKRKNLLLFLKEGPKNIEEIKTNLDTSAVAILPQIKKLRDDSLVFRTE
CCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEC
DSYFLSPLGIAVAERMHAMMRVLNVFSRNYDYWADHAVECLPSPLKSRIGDLENCIFSEP
CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHCHHHHHHCCCC
PDWTHLFEPHREFVEKLTVSRKIKGISAIFFPLYPSLFLSFAKNGADVTLLVTLPVYERI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH
KGEYRSELREFLSLDNTCLYVCEEKIEFSHVVTDKFLSLSLPFSNGAFDHTRDVLCFDPV
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCH
ALKWGEDLFAYYRDRSEKIKKV
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA