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The map label for this gene is srp19

Identifier: 21227659

GI number: 21227659

Start: 1857287

End: 1857592

Strand: Reverse

Name: srp19

Synonym: MM_1557

Alternate gene names: 21227659

Gene position: 1857592-1857287 (Counterclockwise)

Preceding gene: 21227672

Following gene: 21227655

Centisome position: 45.35

GC content: 46.08

Gene sequence:

>306_bases
ATGAAAGATAAGGGAAAACTTGTAATCTGGCCGGCATATATCGACCAGACAAAATCCAGAAGCAGCGGCAGGATAATCTC
ACGGAAAAACTCCATAAAGGAACCGCACCTGAACGAAATCAAAGAAGCTGCCAGACAACTTGGCCTGAACCCGGAAGTGG
AGCCTGAAAAAGCCTATCCCAAATCCTGGTGGGAAGTTAGCGGAAGAGTGCTTGTAGACGATAATGGCCCAAAGTCCGTT
ATTGCAAAACAGATAGCCCTGGCAATCAAAAAAATGAGAGGACAGGAAGTCCCTGCAAAAACATGA

Upstream 100 bases:

>100_bases
CTCAGGGACGGGAGATATTCAGAAATAACCCGGAAATTATGGAAGCTTCCGGGCAGTTTTAAATTTGATGAAAACAATTT
AGGACGCAGATAGCATGATG

Downstream 100 bases:

>100_bases
AAATAGTTTAAACAGTATTTTATATTTCAGGATTAGTGTAATTATCTGCTCGCTGATGATCATTATCCTGATCGCTAATG
AGTGTTATTCCTGATCGCTA

Product: signal recognition particle protein Srp19

Products: NA

Alternate protein names: SRP19

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKDKGKLVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYPKSWWEVSGRVLVDDNGPKSV
IAKQIALAIKKMRGQEVPAKT

Sequences:

>Translated_101_residues
MKDKGKLVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYPKSWWEVSGRVLVDDNGPKSV
IAKQIALAIKKMRGQEVPAKT
>Mature_101_residues
MKDKGKLVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYPKSWWEVSGRVLVDDNGPKSV
IAKQIALAIKKMRGQEVPAKT

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRP19_METMA (Q8PWM7)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633581.1
- ProteinModelPortal:   Q8PWM7
- SMR:   Q8PWM7
- GeneID:   1479899
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1557
- NMPDR:   fig|192952.1.peg.1557
- HOGENOM:   HBG629394
- OMA:   IWPAYID
- ProtClustDB:   PRK00754
- BioCyc:   MMAZ192952:MM1557-MONOMER
- HAMAP:   MF_00305
- InterPro:   IPR002778
- InterPro:   IPR022938
- Gene3D:   G3DSA:3.30.56.30
- PANTHER:   PTHR17453

Pfam domain/function: PF01922 SRP19; SSF69695 Signal_recog_particle_SRP19

EC number: NA

Molecular weight: Translated: 11377; Mature: 11377

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKGKLVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYP
CCCCCCEEEEEHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
KSWWEVSGRVLVDDNGPKSVIAKQIALAIKKMRGQEVPAKT
CCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKDKGKLVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYP
CCCCCCEEEEEHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
KSWWEVSGRVLVDDNGPKSVIAKQIALAIKKMRGQEVPAKT
CCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824