| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227569
Identifier: 21227569
GI number: 21227569
Start: 1750399
End: 1750851
Strand: Direct
Name: 21227569
Synonym: MM_1467
Alternate gene names: NA
Gene position: 1750399-1750851 (Clockwise)
Preceding gene: 21227568
Following gene: 21227571
Centisome position: 42.73
GC content: 30.91
Gene sequence:
>453_bases TTGGTAGAGTCTCCTAAAACAGGAAAGAAAGGAAGACCTAGAAAACCAGCAATTATACCAGATGAAAATCTCAGATATGC TCAGGTTATCAAAAACAAACAAGGAAGTAAGCTTCAGAATATTGAAAAAAGAGTTATCTTTGGTCAAAATATAGATTATA GTGATATATCAACCAGTTTACTAGAAAGGCAAAATCTAACGTTTAGACAGGATAATAACAGGATCTCGAGGAAAACAATA GGATTTTCAAAGAAAATTAAGTGTCTATACAATCAAATCAGGCTTTATTCCACATATTTTAACTTTTGTAGAGATCACAG GGGATTAGCTAAAGAAAAACAAAATGGAGTTTCAGAAAGAAAAACACCAGCAAAAGAAGCTGGAATTACTAAACATAAAT GGACACTAACAGATTTGTTAAATTACAAGAAGAGCAAAATATCAACTAATTAA
Upstream 100 bases:
>100_bases AGTAAACATTACAGATAATCACCTTTCAAATTTAAAACCTCTTTTTGTTACAGACGGATTAAAGTTTTATGCTGAAGCTC TTTTGGAAAAATATGGTAAA
Downstream 100 bases:
>100_bases CGGGGCAGCACCATAATTCCTGATTTAGTTATTTATTTAGTTATTCATTATTTGATACTCAGTATCTCAGCCCAGCTCCG TCTTCTGCACCTGGGGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MVESPKTGKKGRPRKPAIIPDENLRYAQVIKNKQGSKLQNIEKRVIFGQNIDYSDISTSLLERQNLTFRQDNNRISRKTI GFSKKIKCLYNQIRLYSTYFNFCRDHRGLAKEKQNGVSERKTPAKEAGITKHKWTLTDLLNYKKSKISTN
Sequences:
>Translated_150_residues MVESPKTGKKGRPRKPAIIPDENLRYAQVIKNKQGSKLQNIEKRVIFGQNIDYSDISTSLLERQNLTFRQDNNRISRKTI GFSKKIKCLYNQIRLYSTYFNFCRDHRGLAKEKQNGVSERKTPAKEAGITKHKWTLTDLLNYKKSKISTN >Mature_150_residues MVESPKTGKKGRPRKPAIIPDENLRYAQVIKNKQGSKLQNIEKRVIFGQNIDYSDISTSLLERQNLTFRQDNNRISRKTI GFSKKIKCLYNQIRLYSTYFNFCRDHRGLAKEKQNGVSERKTPAKEAGITKHKWTLTDLLNYKKSKISTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17464; Mature: 17464
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESPKTGKKGRPRKPAIIPDENLRYAQVIKNKQGSKLQNIEKRVIFGQNIDYSDISTSL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH LERQNLTFRQDNNRISRKTIGFSKKIKCLYNQIRLYSTYFNFCRDHRGLAKEKQNGVSER HHHCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHH KTPAKEAGITKHKWTLTDLLNYKKSKISTN CCCHHHCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVESPKTGKKGRPRKPAIIPDENLRYAQVIKNKQGSKLQNIEKRVIFGQNIDYSDISTSL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH LERQNLTFRQDNNRISRKTIGFSKKIKCLYNQIRLYSTYFNFCRDHRGLAKEKQNGVSER HHHCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHH KTPAKEAGITKHKWTLTDLLNYKKSKISTN CCCHHHCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA