Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227568

Identifier: 21227568

GI number: 21227568

Start: 1749758

End: 1750225

Strand: Direct

Name: 21227568

Synonym: MM_1466

Alternate gene names: NA

Gene position: 1749758-1750225 (Clockwise)

Preceding gene: 21227565

Following gene: 21227569

Centisome position: 42.72

GC content: 36.32

Gene sequence:

>468_bases
ATGGGGAAAAGAGGAGCAAAACCAAAGTTTACCGATGTTTTCTGTCCTAATAAGGATTGTAAACTCTATGGTATTACTGG
AAAAGAAAATATCATAGGCAATGGCACCTATGAAATCAAGAATAAACGAGTTAGAAAATATATCTGCCGCGAATGCGGCA
GAGTATTCAATGACAGAACAGGTACTTTTTTTGATAATGTCCGTAAAGATGAATCTGATATCAAACTAGCCATTAAAATG
GCTATCAAAGGAATGTCAATACAAGCAATCTCTGATGTACTGGAAGTTCAACCTGCTACAGTTAGTAACTGGTTGTTTCG
CGCAGCGAAACAATGTGATATTGTAAATGAAGACTTAATGAAAGATCTCAACATTCGCAAAGTTGAGATGGACGAACTAT
GGGTAATAGTTGAAAAAAAGTTACACCAAGAACAGAAATTGAAGATGATGGAGCATGGTTGTGGGTAA

Upstream 100 bases:

>100_bases
CTTTTCCTCAAGCAGCAGTTATTTTTCATTAACAATAATTCCGGTGCTCCATTTATATTTAGTTGATATTATATACGTGG
AGAAATATAATATCAATATA

Downstream 100 bases:

>100_bases
GCTTTGCACCTGAATTCAGGTTAATAATTGATTTTGTACTGGGACCAAGAAAACATTATGTGGCGACCGAATTAGTAAAC
ATTACAGATAATCACCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MGKRGAKPKFTDVFCPNKDCKLYGITGKENIIGNGTYEIKNKRVRKYICRECGRVFNDRTGTFFDNVRKDESDIKLAIKM
AIKGMSIQAISDVLEVQPATVSNWLFRAAKQCDIVNEDLMKDLNIRKVEMDELWVIVEKKLHQEQKLKMMEHGCG

Sequences:

>Translated_155_residues
MGKRGAKPKFTDVFCPNKDCKLYGITGKENIIGNGTYEIKNKRVRKYICRECGRVFNDRTGTFFDNVRKDESDIKLAIKM
AIKGMSIQAISDVLEVQPATVSNWLFRAAKQCDIVNEDLMKDLNIRKVEMDELWVIVEKKLHQEQKLKMMEHGCG
>Mature_154_residues
GKRGAKPKFTDVFCPNKDCKLYGITGKENIIGNGTYEIKNKRVRKYICRECGRVFNDRTGTFFDNVRKDESDIKLAIKMA
IKGMSIQAISDVLEVQPATVSNWLFRAAKQCDIVNEDLMKDLNIRKVEMDELWVIVEKKLHQEQKLKMMEHGCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17849; Mature: 17718

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRGAKPKFTDVFCPNKDCKLYGITGKENIIGNGTYEIKNKRVRKYICRECGRVFNDRT
CCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
GTFFDNVRKDESDIKLAIKMAIKGMSIQAISDVLEVQPATVSNWLFRAAKQCDIVNEDLM
CCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
KDLNIRKVEMDELWVIVEKKLHQEQKLKMMEHGCG
HCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKRGAKPKFTDVFCPNKDCKLYGITGKENIIGNGTYEIKNKRVRKYICRECGRVFNDRT
CCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
GTFFDNVRKDESDIKLAIKMAIKGMSIQAISDVLEVQPATVSNWLFRAAKQCDIVNEDLM
CCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
KDLNIRKVEMDELWVIVEKKLHQEQKLKMMEHGCG
HCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA