| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227571
Identifier: 21227571
GI number: 21227571
Start: 1751377
End: 1752243
Strand: Direct
Name: 21227571
Synonym: MM_1469
Alternate gene names: NA
Gene position: 1751377-1752243 (Clockwise)
Preceding gene: 21227569
Following gene: 21227574
Centisome position: 42.75
GC content: 48.33
Gene sequence:
>867_bases ATGGCAAAAGCTGCAGCTAAAACAGGGATGAGCCCAACAGCAATGGTTGCTCTCGAGCAATATTTTCCTGAGAAGCAACG CATCATCGAAGATGACGTGGCTTATCGAATACTGCCTTTCGGCATGAGATCTATCGTATGGCTGATGCGGTTTAACTCGT TAAGAAATCGGATGATCCGGGTTACCAGGAATAACACTCCCGGTCTCTGGGGTGGTATGCTGTGCAGAAAAAGGTACATA GACGAGAAGTTAGTCGAGTCGGCCAATCAGGTTAATGCGGTTGTGAACCTGGGTGCGGGCTTTGATACCCGGGCATACAG GTTGCCAGCTCTATCTAACATGCCAGTCTGGGAGGTCGATCAGCCTGAAAACATTAAGTCCAAGCGGAACCGGTTGTGTA AATTGTTCGGAGCAGTCCCGTCCCATGTCAGTCTTGTGTCGATAGATTTGGATAGGGAAGAATTGGGCTCTGTTCTTGCG TCTTATGGCTACTCCGAGGATATGCGGACATTTTTCATCTGGGAGGCTGTTACACAGTATCTGACTGAAACCGGAATCAG AGCGACTTTTGATTTTCTGGCTAAAGCCGGGCATGGCAGCCTTCTGGCTTTCACATATATTCGCAAAGACTTTCTTGATG GCCGGATTATGTACGGCTGGGAGAATATTTACAAAAAGTACGTAAGGGATAAGATCTGGCTTTTCGGAATGGATCCGGAA GAGTGGCCGGATTTTCTTGAAAGGTACGGCTGGAAGGTAGTCGAGCACGTCGGTTACGAGGAACTTGCTGAGAGGTATAT CAGGCCTACCGGCCGGGAACTTGCTTCTACGCCGGTTGAACGGATCGTTTTTGCGGAAAAAATATAA
Upstream 100 bases:
>100_bases CAAAAATAATGTTTCAGAGTTACTTAACATTTATTTTTCTATGAGATCCGCATGATAACAAAATTAAATGTATATGCTGA CTTAAAATAAGAGAGGCATC
Downstream 100 bases:
>100_bases TTAACTGTGCATGTTCGCCTAACTTTTCTTACGCCAGAGCATGACTGAATCGGCTGAGCCAGCTATTTTCGAGCAAATTA ATGAGAAATATTTTCGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MAKAAAKTGMSPTAMVALEQYFPEKQRIIEDDVAYRILPFGMRSIVWLMRFNSLRNRMIRVTRNNTPGLWGGMLCRKRYI DEKLVESANQVNAVVNLGAGFDTRAYRLPALSNMPVWEVDQPENIKSKRNRLCKLFGAVPSHVSLVSIDLDREELGSVLA SYGYSEDMRTFFIWEAVTQYLTETGIRATFDFLAKAGHGSLLAFTYIRKDFLDGRIMYGWENIYKKYVRDKIWLFGMDPE EWPDFLERYGWKVVEHVGYEELAERYIRPTGRELASTPVERIVFAEKI
Sequences:
>Translated_288_residues MAKAAAKTGMSPTAMVALEQYFPEKQRIIEDDVAYRILPFGMRSIVWLMRFNSLRNRMIRVTRNNTPGLWGGMLCRKRYI DEKLVESANQVNAVVNLGAGFDTRAYRLPALSNMPVWEVDQPENIKSKRNRLCKLFGAVPSHVSLVSIDLDREELGSVLA SYGYSEDMRTFFIWEAVTQYLTETGIRATFDFLAKAGHGSLLAFTYIRKDFLDGRIMYGWENIYKKYVRDKIWLFGMDPE EWPDFLERYGWKVVEHVGYEELAERYIRPTGRELASTPVERIVFAEKI >Mature_287_residues AKAAAKTGMSPTAMVALEQYFPEKQRIIEDDVAYRILPFGMRSIVWLMRFNSLRNRMIRVTRNNTPGLWGGMLCRKRYID EKLVESANQVNAVVNLGAGFDTRAYRLPALSNMPVWEVDQPENIKSKRNRLCKLFGAVPSHVSLVSIDLDREELGSVLAS YGYSEDMRTFFIWEAVTQYLTETGIRATFDFLAKAGHGSLLAFTYIRKDFLDGRIMYGWENIYKKYVRDKIWLFGMDPEE WPDFLERYGWKVVEHVGYEELAERYIRPTGRELASTPVERIVFAEKI
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity [H]
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011610 - InterPro: IPR007213 [H]
Pfam domain/function: PF04072 LCM [H]
EC number: NA
Molecular weight: Translated: 33399; Mature: 33268
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAAAKTGMSPTAMVALEQYFPEKQRIIEDDVAYRILPFGMRSIVWLMRFNSLRNRMIR CCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE VTRNNTPGLWGGMLCRKRYIDEKLVESANQVNAVVNLGAGFDTRAYRLPALSNMPVWEVD EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCEECCC QPENIKSKRNRLCKLFGAVPSHVSLVSIDLDREELGSVLASYGYSEDMRTFFIWEAVTQY CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LTETGIRATFDFLAKAGHGSLLAFTYIRKDFLDGRIMYGWENIYKKYVRDKIWLFGMDPE HHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCEEEECCCHH EWPDFLERYGWKVVEHVGYEELAERYIRPTGRELASTPVERIVFAEKI HHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCHHHHHCHHHHHHHHHCC >Mature Secondary Structure AKAAAKTGMSPTAMVALEQYFPEKQRIIEDDVAYRILPFGMRSIVWLMRFNSLRNRMIR CCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE VTRNNTPGLWGGMLCRKRYIDEKLVESANQVNAVVNLGAGFDTRAYRLPALSNMPVWEVD EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCEECCC QPENIKSKRNRLCKLFGAVPSHVSLVSIDLDREELGSVLASYGYSEDMRTFFIWEAVTQY CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LTETGIRATFDFLAKAGHGSLLAFTYIRKDFLDGRIMYGWENIYKKYVRDKIWLFGMDPE HHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCEEEECCCHH EWPDFLERYGWKVVEHVGYEELAERYIRPTGRELASTPVERIVFAEKI HHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCHHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA