| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is obg [H]
Identifier: 21227552
GI number: 21227552
Start: 1732012
End: 1732992
Strand: Direct
Name: obg [H]
Synonym: MM_1450
Alternate gene names: 21227552
Gene position: 1732012-1732992 (Clockwise)
Preceding gene: 21227551
Following gene: 21227561
Centisome position: 42.28
GC content: 44.14
Gene sequence:
>981_bases ATGAAATCAAGAATCGTTTACGGACCAATTCTTTCCAGAAGGCTTGGCAGGTCCCTGGGAATAGATGTAATAAAGAACAC AGGTTCGAAAAAAAACTGTAATTATGACTGCATTTACTGCCAGCTCGGACACGTTGAGTTAAAACTCGGGAGTCCTGAAG ATGTTAAAGAAGCAGTAACCCCGAAAGAAGTCTCTGAAAGCTTCGAGAAGTTCTATAAAGATGTTGAGGGACTTGACTAT ATCACTTTTTCAGGGACCTGCGAACCTTCTCTTAACCTTTCTCTGGGGGAGATGATCCAGAGTATAAGGGAAATAAGCGG AGTTCCTGTCTGTGTGATAACGAATTCTTCCCTTATGGGAAGAGAGGATGTACGGAAGAATCTGTCTCAGGCAGACCTGG TTGTTGCTACCCTTGTTTCAGGAATCGAAAAAACCTGGAGAAAGATACACAGACCTGCTCCCTGCATAAATTTTCAGGAA ATAATTGAGGGCTTAAGGGAACTTGCAAAAGCCGGTGATGGAAAAAAGCTTGCACTTGAGGTTATGTTTCTTGAGAGTGA AACAGGGGAGCCTCTGAACAGCACTGATGAAGAGGTCGATTGCCTGATAAAAACAATCAGGTACATATGCCCTGATGAGA TCGAAGTCCTGACTATCAGCCGCCCTCCTGCAGAAAAATGGGTAAAACCGGTATCAGAGGAAAGGTTAAGGGAAATTGCT GACCGCTTTATATCAGAGTTTGGAGCTGAAAAAGTAAGGCTGGTTTTAAAGGGCAAAAAGAAAAAGGCAAAAGTTTTACA CCGGGACCTGGAAGAGGAAGTCTATGCCCTTCTCCTCAGGAGGCCCTGTACCTTTGAACAGACATGGCAGGGACTGAGCA TAGACCCTGAAAGTCTCCGCCCTGTCCTCGAAAAATTGCTTGCTGAAGGCAAAATAGAGGAAATAGGTTCCAAAAACAGC GTGTATTACAGGGCAAAATGA
Upstream 100 bases:
>100_bases TCGGACTGGAAAATGGAAGGGTTTCCTGCTGATTTGCCGCTATTCTCTTTCCAGATTTTCTGATTTTTGGGCCCAGATTT TTTTGAAAGGAAGAGTAAAA
Downstream 100 bases:
>100_bases ATTAAATATGGAAACAAAAAAGGAAATTTTTCCATTAAGAAAATTTATCTATTTTTCAGGGGCAGGGAGAGCGTACGACC AGCACTTCCGCTTTTGAATT
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: GTP-binding protein obg [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEVSESFEKFYKDVEGLDY ITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMGREDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQE IIEGLRELAKAGDGKKLALEVMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPVLEKLLAEGKIEEIGSKNS VYYRAK
Sequences:
>Translated_326_residues MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEVSESFEKFYKDVEGLDY ITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMGREDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQE IIEGLRELAKAGDGKKLALEVMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPVLEKLLAEGKIEEIGSKNS VYYRAK >Mature_326_residues MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEVSESFEKFYKDVEGLDY ITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMGREDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQE IIEGLRELAKAGDGKKLALEVMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPVLEKLLAEGKIEEIGSKNS VYYRAK
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR014100 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - InterPro: IPR007197 [H]
Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 36807; Mature: 36807
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVT CCCCEEECHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEEECCEEEECCCCHHHHHCCC PKEVSESFEKFYKDVEGLDYITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMG HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC REDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQEIIEGLRELAKAGDGKKLALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE VMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA EEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHH DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLR HHHHHHHCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH PVLEKLLAEGKIEEIGSKNSVYYRAK HHHHHHHHCCCHHHCCCCCCEEEECC >Mature Secondary Structure MKSRIVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVT CCCCEEECHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEEECCEEEECCCCHHHHHCCC PKEVSESFEKFYKDVEGLDYITFSGTCEPSLNLSLGEMIQSIREISGVPVCVITNSSLMG HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC REDVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQEIIEGLRELAKAGDGKKLALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE VMFLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIA EEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHH DRFISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLR HHHHHHHCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH PVLEKLLAEGKIEEIGSKNSVYYRAK HHHHHHHHCCCHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA