Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227550

Identifier: 21227550

GI number: 21227550

Start: 1730733

End: 1731266

Strand: Direct

Name: 21227550

Synonym: MM_1448

Alternate gene names: NA

Gene position: 1730733-1731266 (Clockwise)

Preceding gene: 21227548

Following gene: 21227551

Centisome position: 42.25

GC content: 50.19

Gene sequence:

>534_bases
ATGGAAAACTATATATATTTTGCATTATTATGCATTACTATGCGCCCCAGAAAAAGACGAATGGTGGATTTCGAACATCC
GGAAAGGCAATTCAGGCCTTTCAGTCCCGAAAGTGAAATTTCCGAAGAGATTTTGTTGACTATCGACGAACTCGAGGCCA
TGAGGCTCAGCTTTCTGGAAAACCTTTCCCAGACCGAGGCTGCGGCTCGTATGGAGATTCACCAGTCCACTTTTCAGAGG
GCTCTGAAAAAAGCACTTGAAAAAGTAACTGATGCGCTTGTACATGGAAAAGCGATCAGAATTGAAGGAGGAGATTATAG
AATGCCAAGAGGAGACAGAACAGGTCCTGCAGGGCAGGGTCCGGCTGGCGGCGGAAGAGGTCGCGGGCAGGGAAAAGGTC
GGGGAGGCCGGTTCGGCGGACCCGAAGGAAACTGCATATGTACCGCCTGCGGATATGAAACTCCCCATACTCCGGGAGTC
AGCTGCAGCCAGGTGAAGTGTGAGAAATGCGGAAGCCCTATGGTCAGGAAATGA

Upstream 100 bases:

>100_bases
AAAGGTTGCTTACATCTCTGTGATCTGGGTTTTATGTATCTTAACTGGCATATCTCTCTTCTTTTCTTTTGAAGTTCATT
TTAAGCTGGAGCCTAAATAG

Downstream 100 bases:

>100_bases
ATTAAAAGGTGGTCTGGAAAATAGAGTGGGAGAAAGGCACAGACATTGTTTTTCTGTTGCTCTATTTTAAATCGTTTTCA
GAATCATTTAAAGATTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MENYIYFALLCITMRPRKRRMVDFEHPERQFRPFSPESEISEEILLTIDELEAMRLSFLENLSQTEAAARMEIHQSTFQR
ALKKALEKVTDALVHGKAIRIEGGDYRMPRGDRTGPAGQGPAGGGRGRGQGKGRGGRFGGPEGNCICTACGYETPHTPGV
SCSQVKCEKCGSPMVRK

Sequences:

>Translated_177_residues
MENYIYFALLCITMRPRKRRMVDFEHPERQFRPFSPESEISEEILLTIDELEAMRLSFLENLSQTEAAARMEIHQSTFQR
ALKKALEKVTDALVHGKAIRIEGGDYRMPRGDRTGPAGQGPAGGGRGRGQGKGRGGRFGGPEGNCICTACGYETPHTPGV
SCSQVKCEKCGSPMVRK
>Mature_177_residues
MENYIYFALLCITMRPRKRRMVDFEHPERQFRPFSPESEISEEILLTIDELEAMRLSFLENLSQTEAAARMEIHQSTFQR
ALKKALEKVTDALVHGKAIRIEGGDYRMPRGDRTGPAGQGPAGGGRGRGQGKGRGGRFGGPEGNCICTACGYETPHTPGV
SCSQVKCEKCGSPMVRK

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002852 [H]

Pfam domain/function: PF02001 DUF134 [H]

EC number: NA

Molecular weight: Translated: 19593; Mature: 19593

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENYIYFALLCITMRPRKRRMVDFEHPERQFRPFSPESEISEEILLTIDELEAMRLSFLE
CCCHHEEHHHHHHCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NLSQTEAAARMEIHQSTFQRALKKALEKVTDALVHGKAIRIEGGDYRMPRGDRTGPAGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCCCC
PAGGGRGRGQGKGRGGRFGGPEGNCICTACGYETPHTPGVSCSQVKCEKCGSPMVRK
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MENYIYFALLCITMRPRKRRMVDFEHPERQFRPFSPESEISEEILLTIDELEAMRLSFLE
CCCHHEEHHHHHHCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NLSQTEAAARMEIHQSTFQRALKKALEKVTDALVHGKAIRIEGGDYRMPRGDRTGPAGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCCCC
PAGGGRGRGQGKGRGGRFGGPEGNCICTACGYETPHTPGVSCSQVKCEKCGSPMVRK
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]