Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227548

Identifier: 21227548

GI number: 21227548

Start: 1729060

End: 1729287

Strand: Direct

Name: 21227548

Synonym: MM_1446

Alternate gene names: NA

Gene position: 1729060-1729287 (Clockwise)

Preceding gene: 161485675

Following gene: 21227550

Centisome position: 42.21

GC content: 46.49

Gene sequence:

>228_bases
GTGGAGCCAGCAATTGCTGACAGCTACCCGGAAAAGAGGTGGATACCCCAGGAGATAAAAACAGTTTATAGACTCTGGAA
AACCCTTCCTGATTCTATAAAAAATCTCAGTGGAATGTTATGCAAGTGCCATTCCGGGATTCAGAAACGTGGCGGAAACC
CCGGGAATCTAACCCGGCTGAACGGATTTAGAGTCCATTCGATCTACATGATCAGGTTTCCTCCTTGA

Upstream 100 bases:

>100_bases
TGTTTAGTGGTTTTTTATCCATAGTGTTACCCCTCGGTGAACTAAAACCCGGATAATTTCCAAGAACAGTATTCAGAACC
CCGGCTTACAGAACATAAGC

Downstream 100 bases:

>100_bases
TAAAATAGAATAATGATCCCTTGGTTGTTTTTTTCTCTATAGCAATCTTAATTGATATGATAAAATGATATTATTTAGTA
TATATGTTTATTGGTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MEPAIADSYPEKRWIPQEIKTVYRLWKTLPDSIKNLSGMLCKCHSGIQKRGGNPGNLTRLNGFRVHSIYMIRFPP

Sequences:

>Translated_75_residues
MEPAIADSYPEKRWIPQEIKTVYRLWKTLPDSIKNLSGMLCKCHSGIQKRGGNPGNLTRLNGFRVHSIYMIRFPP
>Mature_75_residues
MEPAIADSYPEKRWIPQEIKTVYRLWKTLPDSIKNLSGMLCKCHSGIQKRGGNPGNLTRLNGFRVHSIYMIRFPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8657; Mature: 8657

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAIADSYPEKRWIPQEIKTVYRLWKTLPDSIKNLSGMLCKCHSGIQKRGGNPGNLTRL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
NGFRVHSIYMIRFPP
CCEEEEEEEEEEECC
>Mature Secondary Structure
MEPAIADSYPEKRWIPQEIKTVYRLWKTLPDSIKNLSGMLCKCHSGIQKRGGNPGNLTRL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
NGFRVHSIYMIRFPP
CCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA