| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227545
Identifier: 21227545
GI number: 21227545
Start: 1725241
End: 1726356
Strand: Reverse
Name: 21227545
Synonym: MM_1443
Alternate gene names: NA
Gene position: 1726356-1725241 (Counterclockwise)
Preceding gene: 21227546
Following gene: 21227544
Centisome position: 42.14
GC content: 45.61
Gene sequence:
>1116_bases TTGAGAGAGTCCTGGGGTGCTAGCCTGAAAACAATATGCCTTATAGGCGGGAAGCTGCAGGGCTTCGAGGCTGCATACCT ATCTAAGAAAGCCGGAATGAAAGTGCTTGTAATAGACAAAAACCCGCAGGCGCTTATAAGGAATTATGCGGATGAGTTCC AGTGTTTTAACATAACGGAAGAGCCGGAAAAACTCGTCGCGATATCAAAAAATGTTGATGCCATACTGCCGGTAAATGAA AACCTTGAATGTATAGAATTTCTGAATTCTATAAAAGAAAAATTCTCCTGCCCGGTACTTTTCGATTTTGAAGCTTACAG GATCAGCAGGGATAAGAGAAAATCAAAAGAATACTTCGCATCCATAGGAACCCCGACCCCTCAGGACAAACCGTCGGAAC CACCTTATTTTGTAAAGCCTCCCTGCGAAAGCAGCAGTGTGGGAGCGAGAATAATCCATGACAGGAAAGAGCTTAAAGAG CTTGAGCCCGGGATGCTCATAGAAGAATACGTTGAAGGGGAAGTGGTCTCACTTGAGGTCATAGGGGATGGAAATAATTT TGCTGTGGTAAAGGAAACCCTTGTACATATCGATGACACCTATGACTGCCATATGGTGACCCCTCTCCCTCTAGACCCTT CCTTCAGGGAACTATCCTACTCCCTTGCAGCAAACCTGCCCTTAAAAGGAATTATGGACGTGGAAGCGATTTCCGGCCCC CTGGGGTTAAAAGTTATTGAGATAGATGCCCGTTTCCCGAGCCAGACTCCGACTGCGGTCTATTATTCTTCCGGGATCAA CCTCATAGAACTCCTGTTCCGGGCTTTTAATGGAGGCATAGAAGAGATCAAAACTCTCCCTGAAGACAGGTACTGCATTT ACGAACATCTCATGCTTGCAGAAAATGGAGTACTTATCCCTGTGGGAGAACAGGTCCTGTCCATGGGAAATGATTACGGC AATTATTATGAAGAACCTGGAATAGAGATTTTCCTGTGCAAAGGAGAGAACCCTGTATTCACCCTGGTTTTCTGGGGCAG AGACAGGGAAGAAGCTGAAGCTAGAAAAAACAAAGGGCTTTCGATTCTAAAAAGCCGTTTCGGAGCTGCTGCATAA
Upstream 100 bases:
>100_bases GCCAATTACGACCGCGGCATGGAAGAGAGGGACAGGGACGTTACAAGCGTTGTCAAAAGGCTGAAGGTTATGGGAATGGA ACCTGCGCCGCAGGCTGAGT
Downstream 100 bases:
>100_bases AGCAGGAAGAATTTTTAGAATAAAAAGAGGTAAAAAAATGGCACTTTTAACCCCAGAAGACCTGGAAAATATTAACAAAC AGCTTCAAGAAGCTGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITEEPEKLVAISKNVDAILPVNE NLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFASIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKE LEPGMLIEEYVEGEVVSLEVIGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLAENGVLIPVGEQVLSMGNDYG NYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGLSILKSRFGAAA
Sequences:
>Translated_371_residues MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITEEPEKLVAISKNVDAILPVNE NLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFASIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKE LEPGMLIEEYVEGEVVSLEVIGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLAENGVLIPVGEQVLSMGNDYG NYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGLSILKSRFGAAA >Mature_371_residues MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITEEPEKLVAISKNVDAILPVNE NLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFASIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKE LEPGMLIEEYVEGEVVSLEVIGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLAENGVLIPVGEQVLSMGNDYG NYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGLSILKSRFGAAA
Specific function: Unknown
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41516; Mature: 41516
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITE CCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEEECCCC EPEKLVAISKNVDAILPVNENLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFA CCHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEECHHHHHCHHHHHHHHHHH SIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKELEPGMLIEEYVEGEVVSLEV HCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHCCCCCHHHHHCCCEEEEEEE IGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP EECCCCEEEEEEEHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCC LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLA CCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH ENGVLIPVGEQVLSMGNDYGNYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGL CCCEEEECCHHHHHCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHCCH SILKSRFGAAA HHHHHHCCCCC >Mature Secondary Structure MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITE CCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEEECCCC EPEKLVAISKNVDAILPVNENLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFA CCHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEECHHHHHCHHHHHHHHHHH SIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKELEPGMLIEEYVEGEVVSLEV HCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHCCCCCHHHHHCCCEEEEEEE IGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP EECCCCEEEEEEEHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCC LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLA CCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH ENGVLIPVGEQVLSMGNDYGNYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGL CCCEEEECCHHHHHCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHCCH SILKSRFGAAA HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA