Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227545

Identifier: 21227545

GI number: 21227545

Start: 1725241

End: 1726356

Strand: Reverse

Name: 21227545

Synonym: MM_1443

Alternate gene names: NA

Gene position: 1726356-1725241 (Counterclockwise)

Preceding gene: 21227546

Following gene: 21227544

Centisome position: 42.14

GC content: 45.61

Gene sequence:

>1116_bases
TTGAGAGAGTCCTGGGGTGCTAGCCTGAAAACAATATGCCTTATAGGCGGGAAGCTGCAGGGCTTCGAGGCTGCATACCT
ATCTAAGAAAGCCGGAATGAAAGTGCTTGTAATAGACAAAAACCCGCAGGCGCTTATAAGGAATTATGCGGATGAGTTCC
AGTGTTTTAACATAACGGAAGAGCCGGAAAAACTCGTCGCGATATCAAAAAATGTTGATGCCATACTGCCGGTAAATGAA
AACCTTGAATGTATAGAATTTCTGAATTCTATAAAAGAAAAATTCTCCTGCCCGGTACTTTTCGATTTTGAAGCTTACAG
GATCAGCAGGGATAAGAGAAAATCAAAAGAATACTTCGCATCCATAGGAACCCCGACCCCTCAGGACAAACCGTCGGAAC
CACCTTATTTTGTAAAGCCTCCCTGCGAAAGCAGCAGTGTGGGAGCGAGAATAATCCATGACAGGAAAGAGCTTAAAGAG
CTTGAGCCCGGGATGCTCATAGAAGAATACGTTGAAGGGGAAGTGGTCTCACTTGAGGTCATAGGGGATGGAAATAATTT
TGCTGTGGTAAAGGAAACCCTTGTACATATCGATGACACCTATGACTGCCATATGGTGACCCCTCTCCCTCTAGACCCTT
CCTTCAGGGAACTATCCTACTCCCTTGCAGCAAACCTGCCCTTAAAAGGAATTATGGACGTGGAAGCGATTTCCGGCCCC
CTGGGGTTAAAAGTTATTGAGATAGATGCCCGTTTCCCGAGCCAGACTCCGACTGCGGTCTATTATTCTTCCGGGATCAA
CCTCATAGAACTCCTGTTCCGGGCTTTTAATGGAGGCATAGAAGAGATCAAAACTCTCCCTGAAGACAGGTACTGCATTT
ACGAACATCTCATGCTTGCAGAAAATGGAGTACTTATCCCTGTGGGAGAACAGGTCCTGTCCATGGGAAATGATTACGGC
AATTATTATGAAGAACCTGGAATAGAGATTTTCCTGTGCAAAGGAGAGAACCCTGTATTCACCCTGGTTTTCTGGGGCAG
AGACAGGGAAGAAGCTGAAGCTAGAAAAAACAAAGGGCTTTCGATTCTAAAAAGCCGTTTCGGAGCTGCTGCATAA

Upstream 100 bases:

>100_bases
GCCAATTACGACCGCGGCATGGAAGAGAGGGACAGGGACGTTACAAGCGTTGTCAAAAGGCTGAAGGTTATGGGAATGGA
ACCTGCGCCGCAGGCTGAGT

Downstream 100 bases:

>100_bases
AGCAGGAAGAATTTTTAGAATAAAAAGAGGTAAAAAAATGGCACTTTTAACCCCAGAAGACCTGGAAAATATTAACAAAC
AGCTTCAAGAAGCTGATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITEEPEKLVAISKNVDAILPVNE
NLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFASIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKE
LEPGMLIEEYVEGEVVSLEVIGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP
LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLAENGVLIPVGEQVLSMGNDYG
NYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGLSILKSRFGAAA

Sequences:

>Translated_371_residues
MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITEEPEKLVAISKNVDAILPVNE
NLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFASIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKE
LEPGMLIEEYVEGEVVSLEVIGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP
LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLAENGVLIPVGEQVLSMGNDYG
NYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGLSILKSRFGAAA
>Mature_371_residues
MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITEEPEKLVAISKNVDAILPVNE
NLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFASIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKE
LEPGMLIEEYVEGEVVSLEVIGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP
LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLAENGVLIPVGEQVLSMGNDYG
NYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGLSILKSRFGAAA

Specific function: Unknown

COG id: COG0458

COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41516; Mature: 41516

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITE
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEEECCCC
EPEKLVAISKNVDAILPVNENLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFA
CCHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEECHHHHHCHHHHHHHHHHH
SIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKELEPGMLIEEYVEGEVVSLEV
HCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHCCCCCHHHHHCCCEEEEEEE
IGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP
EECCCCEEEEEEEHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCC
LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLA
CCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
ENGVLIPVGEQVLSMGNDYGNYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGL
CCCEEEECCHHHHHCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHCCH
SILKSRFGAAA
HHHHHHCCCCC
>Mature Secondary Structure
MRESWGASLKTICLIGGKLQGFEAAYLSKKAGMKVLVIDKNPQALIRNYADEFQCFNITE
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEEECCCC
EPEKLVAISKNVDAILPVNENLECIEFLNSIKEKFSCPVLFDFEAYRISRDKRKSKEYFA
CCHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEECHHHHHCHHHHHHHHHHH
SIGTPTPQDKPSEPPYFVKPPCESSSVGARIIHDRKELKELEPGMLIEEYVEGEVVSLEV
HCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHCCCCCHHHHHCCCEEEEEEE
IGDGNNFAVVKETLVHIDDTYDCHMVTPLPLDPSFRELSYSLAANLPLKGIMDVEAISGP
EECCCCEEEEEEEHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCC
LGLKVIEIDARFPSQTPTAVYYSSGINLIELLFRAFNGGIEEIKTLPEDRYCIYEHLMLA
CCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
ENGVLIPVGEQVLSMGNDYGNYYEEPGIEIFLCKGENPVFTLVFWGRDREEAEARKNKGL
CCCEEEECCHHHHHCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHCCH
SILKSRFGAAA
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA