| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is thiH [C]
Identifier: 21227546
GI number: 21227546
Start: 1726334
End: 1727383
Strand: Reverse
Name: thiH [C]
Synonym: MM_1444
Alternate gene names: 21227546
Gene position: 1727383-1726334 (Counterclockwise)
Preceding gene: 21227547
Following gene: 21227545
Centisome position: 42.17
GC content: 45.33
Gene sequence:
>1050_bases TTGATCCAGAAAATGGCAACCGAAGAACTTGACAGGTTCGGGGAGAAAATTATTGAAGGTTTTAAATTGTCTGATGATGA CCTCAGGGCTCTTCTTTCTCTTGAATTCGAAGAAGAGCTGGAAAAGCTTTACTATGTAGCTAGAAAGGTCAGAAACTATT ATTTCGGCAACAGGGTGTTTCTTAACTGTTTTATTTATTTCTCAACTTATTGTAAAAACCAGTGCTCTTTTTGCTACTAT AACTGTAAAAACGAAATTAACCGCTACCGCCTGACCGGTGAAGAGGTTAAAGAGATGTGCAAAGCCCTGAAAGGTGCAGG CTTTCACATGATCGACCTGACAATGGGAGAGGATCCCTATTACTATGATGACCCTGACCGCTTCGTTGAACTTGTCAGGA CAGTAAAAGAAGAACTCGGGCTTCCAATAATGATTTCTCCGGGAGTTATGGATGACAGCACCCTCCTGAAAGCCAGGGAA GAAGGAGCAAATTTCTTTGCCCTTTATCAGGAGACTTATGACCGCGAACTTTATGGAAAGCTAAGGGTAGGTCAGTCCTT CGAAGGAAGGTTTAATGCCCGCAGGTTTGCAAAAGAACAGGGGTACTGTATAGAAGACGGCATTCTTACCGGCGTAGGAA ATGATATCGAATCAACTCTTATATCCCTGAAGGGGATGAAAGCAAACAATCCTGATATGGTAAGGGTAATGACTTTTCTG CCTCAGGAAGGAACTCCGCTTGAAGGTTTCAGCGATAGTTCAAAGCTTTCGGAGCTGAAAATCATAGCGATTCTCAGGCT CATGTTTCCTGAATGCCTGATACCGGCTTCTCTTGACCTTGAAGGCATAGACGGCATGGTGCACCGTTTAAATGCCGGAG CAAATATTGTAACCTCCATCCTCCCAGATTCACGCCTGGAAGGGGTTGCCAATTACGACCGCGGCATGGAAGAGAGGGAC AGGGACGTTACAAGCGTTGTCAAAAGGCTGAAGGTTATGGGAATGGAACCTGCGCCGCAGGCTGAGTTTGAGAGAGTCCT GGGGTGCTAG
Upstream 100 bases:
>100_bases ACTTAAAATGGCAAAAAGATCCGGATGGGGCTGACGCGAAAGGAATTTGAAAGTAAGGTTGTAAGGATAAAAAATTTTAA ATCTATGAGAGGGTGAAAGT
Downstream 100 bases:
>100_bases CCTGAAAACAATATGCCTTATAGGCGGGAAGCTGCAGGGCTTCGAGGCTGCATACCTATCTAAGAAAGCCGGAATGAAAG TGCTTGTAATAGACAAAAAC
Product: biotin synthetase
Products: biotin
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIQKMATEELDRFGEKIIEGFKLSDDDLRALLSLEFEEELEKLYYVARKVRNYYFGNRVFLNCFIYFSTYCKNQCSFCYY NCKNEINRYRLTGEEVKEMCKALKGAGFHMIDLTMGEDPYYYDDPDRFVELVRTVKEELGLPIMISPGVMDDSTLLKARE EGANFFALYQETYDRELYGKLRVGQSFEGRFNARRFAKEQGYCIEDGILTGVGNDIESTLISLKGMKANNPDMVRVMTFL PQEGTPLEGFSDSSKLSELKIIAILRLMFPECLIPASLDLEGIDGMVHRLNAGANIVTSILPDSRLEGVANYDRGMEERD RDVTSVVKRLKVMGMEPAPQAEFERVLGC
Sequences:
>Translated_349_residues MIQKMATEELDRFGEKIIEGFKLSDDDLRALLSLEFEEELEKLYYVARKVRNYYFGNRVFLNCFIYFSTYCKNQCSFCYY NCKNEINRYRLTGEEVKEMCKALKGAGFHMIDLTMGEDPYYYDDPDRFVELVRTVKEELGLPIMISPGVMDDSTLLKARE EGANFFALYQETYDRELYGKLRVGQSFEGRFNARRFAKEQGYCIEDGILTGVGNDIESTLISLKGMKANNPDMVRVMTFL PQEGTPLEGFSDSSKLSELKIIAILRLMFPECLIPASLDLEGIDGMVHRLNAGANIVTSILPDSRLEGVANYDRGMEERD RDVTSVVKRLKVMGMEPAPQAEFERVLGC >Mature_349_residues MIQKMATEELDRFGEKIIEGFKLSDDDLRALLSLEFEEELEKLYYVARKVRNYYFGNRVFLNCFIYFSTYCKNQCSFCYY NCKNEINRYRLTGEEVKEMCKALKGAGFHMIDLTMGEDPYYYDDPDRFVELVRTVKEELGLPIMISPGVMDDSTLLKARE EGANFFALYQETYDRELYGKLRVGQSFEGRFNARRFAKEQGYCIEDGILTGVGNDIESTLISLKGMKANNPDMVRVMTFL PQEGTPLEGFSDSSKLSELKIIAILRLMFPECLIPASLDLEGIDGMVHRLNAGANIVTSILPDSRLEGVANYDRGMEERD RDVTSVVKRLKVMGMEPAPQAEFERVLGC
Specific function: Required For The Synthesis Of The Thiazole Moiety Of Thiamine. [C]
COG id: COG0502
COG function: function code H; Biotin synthase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790423, Length=167, Percent_Identity=26.3473053892216, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010722 - InterPro: IPR006638 - InterPro: IPR007197 [H]
Pfam domain/function: PF06968 BATS; PF04055 Radical_SAM [H]
EC number: 2.8.1.6
Molecular weight: Translated: 39959; Mature: 39959
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKMATEELDRFGEKIIEGFKLSDDDLRALLSLEFEEELEKLYYVARKVRNYYFGNRVF CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LNCFIYFSTYCKNQCSFCYYNCKNEINRYRLTGEEVKEMCKALKGAGFHMIDLTMGEDPY HHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC YYDDPDRFVELVRTVKEELGLPIMISPGVMDDSTLLKAREEGANFFALYQETYDRELYGK EECCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHH LRVGQSFEGRFNARRFAKEQGYCIEDGILTGVGNDIESTLISLKGMKANNPDMVRVMTFL HHCCCCCCCCHHHHHHHHHCCCEEECCCEECCCCHHHHHHHHHCCCCCCCCCHHHHEECC PQEGTPLEGFSDSSKLSELKIIAILRLMFPECLIPASLDLEGIDGMVHRLNAGANIVTSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHH LPDSRLEGVANYDRGMEERDRDVTSVVKRLKVMGMEPAPQAEFERVLGC CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MIQKMATEELDRFGEKIIEGFKLSDDDLRALLSLEFEEELEKLYYVARKVRNYYFGNRVF CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LNCFIYFSTYCKNQCSFCYYNCKNEINRYRLTGEEVKEMCKALKGAGFHMIDLTMGEDPY HHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC YYDDPDRFVELVRTVKEELGLPIMISPGVMDDSTLLKAREEGANFFALYQETYDRELYGK EECCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHH LRVGQSFEGRFNARRFAKEQGYCIEDGILTGVGNDIESTLISLKGMKANNPDMVRVMTFL HHCCCCCCCCHHHHHHHHHCCCEEECCCEECCCCHHHHHHHHHCCCCCCCCCHHHHEECC PQEGTPLEGFSDSSKLSELKIIAILRLMFPECLIPASLDLEGIDGMVHRLNAGANIVTSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHH LPDSRLEGVANYDRGMEERDRDVTSVVKRLKVMGMEPAPQAEFERVLGC CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dethiobiotin; sulfur
Specific reaction: dethiobiotin + sulfur = biotin
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]