Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227544

Identifier: 21227544

GI number: 21227544

Start: 1724409

End: 1725203

Strand: Reverse

Name: 21227544

Synonym: MM_1442

Alternate gene names: NA

Gene position: 1725203-1724409 (Counterclockwise)

Preceding gene: 21227545

Following gene: 21227541

Centisome position: 42.12

GC content: 45.16

Gene sequence:

>795_bases
ATGGCACTTTTAACCCCAGAAGACCTGGAAAATATTAACAAACAGCTTCAAGAAGCTGATTCTACTGTCCGCAGAGTTAC
AGGGCTTGATATAAAAGGTATCTGTAAAGATTTCTACGGCACAACTCCATGCTGTGAAAAAGTAGGTATCGTGCCTGTGA
CCTCAGGGAACGGGATCATAGGGAGCTTTTCCGAATCCCTGAATGCAATTGCCGGGTATTTCGGGTTTGACAGTTTTATT
ACTGATATGCCTGACGTCAGCGGATATTATGAGGCAGTAAAGAACGGAGCCCGGATCATACTTATGGCAGATGATAATAC
CTTCCTTGCCCACAACCTGAAAAATGGAAAAATCGCCAATAACCAGCCGTGTACAGGCATAATTTATGCTGAAATAGCTT
CAAGATACCTGAAAGCCGATTCCAAAGAAGTGCTTGCCGTGGGTCTTGGGAAGGTTGGATTTCCGGGAGCAGCCCATCTC
GTACAGAAAGGCTTCAAGGTTTACGGATATGATGCTGACAGAACCCTTCTAGAAAAAAGCGTTTCCAGCCTCGGAATTAT
ACCTTTCAATCCCGTCAGCCCCGAAGGCGACAGGCAAAGGAAGTTTTCCATTATTTTCGAAGCAACCCCCTGTGCAGACA
CGATTCCGGAATCCGTAATTTCGGAAAACTGTGTGATTTCTACCCCTGGGATACCCTGTGCAATCTCAAAGGAGCTGCAA
AAAAAGTGTGGAGTTGAACTTGTAATGGAACCACTGGGGATAGGTACAGCATCAATGCTGTATTCTGTACTCTAA

Upstream 100 bases:

>100_bases
GCTGAAGCTAGAAAAAACAAAGGGCTTTCGATTCTAAAAAGCCGTTTCGGAGCTGCTGCATAAAGCAGGAAGAATTTTTA
GAATAAAAAGAGGTAAAAAA

Downstream 100 bases:

>100_bases
ACAGGAGAAAATCAATATCCTGAACAGGGATGAACCAGAGAAAAAAATGTAGAATAACACAGAGCAGGGGGCAGCTCGCC
CCTCTGTTGTGAACTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MALLTPEDLENINKQLQEADSTVRRVTGLDIKGICKDFYGTTPCCEKVGIVPVTSGNGIIGSFSESLNAIAGYFGFDSFI
TDMPDVSGYYEAVKNGARIILMADDNTFLAHNLKNGKIANNQPCTGIIYAEIASRYLKADSKEVLAVGLGKVGFPGAAHL
VQKGFKVYGYDADRTLLEKSVSSLGIIPFNPVSPEGDRQRKFSIIFEATPCADTIPESVISENCVISTPGIPCAISKELQ
KKCGVELVMEPLGIGTASMLYSVL

Sequences:

>Translated_264_residues
MALLTPEDLENINKQLQEADSTVRRVTGLDIKGICKDFYGTTPCCEKVGIVPVTSGNGIIGSFSESLNAIAGYFGFDSFI
TDMPDVSGYYEAVKNGARIILMADDNTFLAHNLKNGKIANNQPCTGIIYAEIASRYLKADSKEVLAVGLGKVGFPGAAHL
VQKGFKVYGYDADRTLLEKSVSSLGIIPFNPVSPEGDRQRKFSIIFEATPCADTIPESVISENCVISTPGIPCAISKELQ
KKCGVELVMEPLGIGTASMLYSVL
>Mature_263_residues
ALLTPEDLENINKQLQEADSTVRRVTGLDIKGICKDFYGTTPCCEKVGIVPVTSGNGIIGSFSESLNAIAGYFGFDSFIT
DMPDVSGYYEAVKNGARIILMADDNTFLAHNLKNGKIANNQPCTGIIYAEIASRYLKADSKEVLAVGLGKVGFPGAAHLV
QKGFKVYGYDADRTLLEKSVSSLGIIPFNPVSPEGDRQRKFSIIFEATPCADTIPESVISENCVISTPGIPCAISKELQK
KCGVELVMEPLGIGTASMLYSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28289; Mature: 28158

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLTPEDLENINKQLQEADSTVRRVTGLDIKGICKDFYGTTPCCEKVGIVPVTSGNGII
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCEEEECCCCCE
GSFSESLNAIAGYFGFDSFITDMPDVSGYYEAVKNGARIILMADDNTFLAHNLKNGKIAN
ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCC
NQPCTGIIYAEIASRYLKADSKEVLAVGLGKVGFPGAAHLVQKGFKVYGYDADRTLLEKS
CCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEECCHHHHHHHHH
VSSLGIIPFNPVSPEGDRQRKFSIIFEATPCADTIPESVISENCVISTPGIPCAISKELQ
HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHH
KKCGVELVMEPLGIGTASMLYSVL
HHCCHHEEHHHCCCCHHHHHHHHC
>Mature Secondary Structure 
ALLTPEDLENINKQLQEADSTVRRVTGLDIKGICKDFYGTTPCCEKVGIVPVTSGNGII
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCEEEECCCCCE
GSFSESLNAIAGYFGFDSFITDMPDVSGYYEAVKNGARIILMADDNTFLAHNLKNGKIAN
ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCC
NQPCTGIIYAEIASRYLKADSKEVLAVGLGKVGFPGAAHLVQKGFKVYGYDADRTLLEKS
CCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEECCHHHHHHHHH
VSSLGIIPFNPVSPEGDRQRKFSIIFEATPCADTIPESVISENCVISTPGIPCAISKELQ
HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHH
KKCGVELVMEPLGIGTASMLYSVL
HHCCHHEEHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA