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The map label for this gene is secF [C]

Identifier: 21227526

GI number: 21227526

Start: 1706127

End: 1707032

Strand: Direct

Name: secF [C]

Synonym: MM_1424

Alternate gene names: 21227526

Gene position: 1706127-1707032 (Clockwise)

Preceding gene: 21227523

Following gene: 21227527

Centisome position: 41.65

GC content: 45.25

Gene sequence:

>906_bases
ATGGCAACAGGTTTGACCGAATTTTTAGATAATTTCGTGAAAAGTCACGATAATCGCCAGTTGCTGGCATTCCCCCTTGC
AGTACTTGCACTTTCTTTAGTAGTACTGCTAGTTTCTTTTGTAAGCAGCGGGTCGCCATTAATCCTGGGAATGGAATTTC
AGGGCGGTACCCAGATTTCGTTAGAAACTACCGAATCTCCTGCTGTACTTGAAAATATGTATTCTTCTTATCCTATCACG
GATGTCAGGCAGGCCGGAAGCAGAGTTATCATGCAGTTCGGGATTATGGATAACGAACAGCAGCGCCAGCTTGAAGAAGA
TGTAATGGGCCGTTATTCCAATGTGCAGATCCAGCAGGTTGGACCTGTTTATGGTCAGGAACTTCAGGTGCAGGCTTTAC
AGGCCCTTGCTATTTCTTTTATAGGGATGGCAATAATTGTGTTTTTGATCTTCAGGACCCTTATCCCTTCTGCTGCGGTT
ATACTCTCTGCCTTTTCTGATATTGCGATTGCGGCTGCTTTCATGAGGGTTGCAGGGATCGAATTGTCCCTGGGAACACT
TGCGGCTCTGCTTATGCTTATCGGTTATTCTGTAGATAGTGACATTCTGCTCACAAATAGAGTACTTAAACGCAGGGGGC
CAGTAGAAGAGAAAATTTCCAGGGCTATGCACACAGGTATCACAATGACTACCACAACCCTTGCAGCGCTCACTGCAATG
TTCATAGTCTCAACTTTCGCCTACCTGGTCGTTCCCTCATTCACACAGATCACTCTGCTTTCGCAGATTTCAATAGTGTT
GATTGCGGGACTTTTTGCAGACATGATGAATACCTGGCTGCTGAATACGGGGATTCTAAGGTGGTATTCTCTGAAACCCG
AATTCAGAGGGAGGTATAATAGATGA

Upstream 100 bases:

>100_bases
TCCGTGTTCTAAATTTGAACGTTTTCTGGACTCCATGTCCGGCAAAAAAACTCGGATAGATTCAAGAAAAAATAGACGCA
TTCATCCGGAGTATTTAATT

Downstream 100 bases:

>100_bases
GCGATAAAAAAGGACTTCTTAAAAATCCGAGAGTCATTATCTTCATTCTGATCCTTCTTGGCTCTTTAATAGCCATCCAC
CCAAGCTATACACCCGGCGA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MATGLTEFLDNFVKSHDNRQLLAFPLAVLALSLVVLLVSFVSSGSPLILGMEFQGGTQISLETTESPAVLENMYSSYPIT
DVRQAGSRVIMQFGIMDNEQQRQLEEDVMGRYSNVQIQQVGPVYGQELQVQALQALAISFIGMAIIVFLIFRTLIPSAAV
ILSAFSDIAIAAAFMRVAGIELSLGTLAALLMLIGYSVDSDILLTNRVLKRRGPVEEKISRAMHTGITMTTTTLAALTAM
FIVSTFAYLVVPSFTQITLLSQISIVLIAGLFADMMNTWLLNTGILRWYSLKPEFRGRYNR

Sequences:

>Translated_301_residues
MATGLTEFLDNFVKSHDNRQLLAFPLAVLALSLVVLLVSFVSSGSPLILGMEFQGGTQISLETTESPAVLENMYSSYPIT
DVRQAGSRVIMQFGIMDNEQQRQLEEDVMGRYSNVQIQQVGPVYGQELQVQALQALAISFIGMAIIVFLIFRTLIPSAAV
ILSAFSDIAIAAAFMRVAGIELSLGTLAALLMLIGYSVDSDILLTNRVLKRRGPVEEKISRAMHTGITMTTTTLAALTAM
FIVSTFAYLVVPSFTQITLLSQISIVLIAGLFADMMNTWLLNTGILRWYSLKPEFRGRYNR
>Mature_300_residues
ATGLTEFLDNFVKSHDNRQLLAFPLAVLALSLVVLLVSFVSSGSPLILGMEFQGGTQISLETTESPAVLENMYSSYPITD
VRQAGSRVIMQFGIMDNEQQRQLEEDVMGRYSNVQIQQVGPVYGQELQVQALQALAISFIGMAIIVFLIFRTLIPSAAVI
LSAFSDIAIAAAFMRVAGIELSLGTLAALLMLIGYSVDSDILLTNRVLKRRGPVEEKISRAMHTGITMTTTTLAALTAMF
IVSTFAYLVVPSFTQITLLSQISIVLIAGLFADMMNTWLLNTGILRWYSLKPEFRGRYNR

Specific function: Involved In Protein Export. [C]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33075; Mature: 32944

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGLTEFLDNFVKSHDNRQLLAFPLAVLALSLVVLLVSFVSSGSPLILGMEFQGGTQIS
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
LETTESPAVLENMYSSYPITDVRQAGSRVIMQFGIMDNEQQRQLEEDVMGRYSNVQIQQV
EECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
GPVYGQELQVQALQALAISFIGMAIIVFLIFRTLIPSAAVILSAFSDIAIAAAFMRVAGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ELSLGTLAALLMLIGYSVDSDILLTNRVLKRRGPVEEKISRAMHTGITMTTTTLAALTAM
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
FIVSTFAYLVVPSFTQITLLSQISIVLIAGLFADMMNTWLLNTGILRWYSLKPEFRGRYN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCC
R
C
>Mature Secondary Structure 
ATGLTEFLDNFVKSHDNRQLLAFPLAVLALSLVVLLVSFVSSGSPLILGMEFQGGTQIS
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
LETTESPAVLENMYSSYPITDVRQAGSRVIMQFGIMDNEQQRQLEEDVMGRYSNVQIQQV
EECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
GPVYGQELQVQALQALAISFIGMAIIVFLIFRTLIPSAAVILSAFSDIAIAAAFMRVAGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ELSLGTLAALLMLIGYSVDSDILLTNRVLKRRGPVEEKISRAMHTGITMTTTTLAALTAM
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
FIVSTFAYLVVPSFTQITLLSQISIVLIAGLFADMMNTWLLNTGILRWYSLKPEFRGRYN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]