| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is ubiE [H]
Identifier: 21227379
GI number: 21227379
Start: 1512801
End: 1513550
Strand: Reverse
Name: ubiE [H]
Synonym: MM_1277
Alternate gene names: 21227379
Gene position: 1513550-1512801 (Counterclockwise)
Preceding gene: 21227380
Following gene: 21227372
Centisome position: 36.95
GC content: 44.67
Gene sequence:
>750_bases TTGATGGAAACTAAGGAAATAATCAGAAACTACTGGGACCACCGCAGCGAGATCTACAGCACTGGCATTGTGGAGTACTC TGAAGAGGAAAGGATTGCCTGGAAAAATATGCTTGCTTCAAAGCTGGGCGGGAGAAAACGCCTTGAGATACTTGACGTGG GCACAGGACCTGGCCAGCTTGCTCTGATGTTTGCAGAGATGGGACATCATTTAACTGCTGTCGATCTGTCTGCCAGCATG CTTGAAAAAGCCAGGAAAAATGCCTTACAGAGATCTCTTGATATTAATTTTATTCAGGGGGACGCAGAAAATTTGCAGCT TCCTGACGCACATTTCGATGTTGTGTCCAGCAAATTCCTCCTCTGGACACTTCCTGACCCGAAAAAGGCTCTCCTGGAAT GGAAGAGAGTGTTGAAGAAAGACGGCATGATAATTGCTATTGATGGGGACTGGTACAGCTCCGGGATATTCCTGAAATCG ATCCGTACAGTTTCCGGACTCATCCGGTCTGTAAAGGAAAGAAATCGTCACGACCCTTTTAAGAATAAATACCAGCTGAT TAAAAATGATCTCCCTCTTTATAGCTTAAAACCCGGTAGGGTATTCGGTTTATTGAATGATGCCGGGTTTGAGGAGATTA ACATTGAACGTATGGATTCTCTTTGCCTTTCTGCCAGGAAACACGGAAGCCTGCTGGATAAGCTCGATTATTCCCATCCG ATTTATTTCATAAGGGCTGTTAAAAAGTGA
Upstream 100 bases:
>100_bases AATATCGTATTACAAATATTGAATTATTTATGTTAACATTTTTTCACTCTATACTTGATCATTAATTAGACTGGTTATAA AATCGCTTTCATGGAGTAAT
Downstream 100 bases:
>100_bases TCGCGGTTTCTGAACCTTAAGAAATCCACAGATAAATAATACGATTATAATACTCTAACATATATGAATAATAAAACTCT AACAATATGAATAAAAAATA
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MMETKEIIRNYWDHRSEIYSTGIVEYSEEERIAWKNMLASKLGGRKRLEILDVGTGPGQLALMFAEMGHHLTAVDLSASM LEKARKNALQRSLDINFIQGDAENLQLPDAHFDVVSSKFLLWTLPDPKKALLEWKRVLKKDGMIIAIDGDWYSSGIFLKS IRTVSGLIRSVKERNRHDPFKNKYQLIKNDLPLYSLKPGRVFGLLNDAGFEEINIERMDSLCLSARKHGSLLDKLDYSHP IYFIRAVKK
Sequences:
>Translated_249_residues MMETKEIIRNYWDHRSEIYSTGIVEYSEEERIAWKNMLASKLGGRKRLEILDVGTGPGQLALMFAEMGHHLTAVDLSASM LEKARKNALQRSLDINFIQGDAENLQLPDAHFDVVSSKFLLWTLPDPKKALLEWKRVLKKDGMIIAIDGDWYSSGIFLKS IRTVSGLIRSVKERNRHDPFKNKYQLIKNDLPLYSLKPGRVFGLLNDAGFEEINIERMDSLCLSARKHGSLLDKLDYSHP IYFIRAVKK >Mature_249_residues MMETKEIIRNYWDHRSEIYSTGIVEYSEEERIAWKNMLASKLGGRKRLEILDVGTGPGQLALMFAEMGHHLTAVDLSASM LEKARKNALQRSLDINFIQGDAENLQLPDAHFDVVSSKFLLWTLPDPKKALLEWKRVLKKDGMIIAIDGDWYSSGIFLKS IRTVSGLIRSVKERNRHDPFKNKYQLIKNDLPLYSLKPGRVFGLLNDAGFEEINIERMDSLCLSARKHGSLLDKLDYSHP IYFIRAVKK
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 28595; Mature: 28595
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMETKEIIRNYWDHRSEIYSTGIVEYSEEERIAWKNMLASKLGGRKRLEILDVGTGPGQL CCCHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH ALMFAEMGHHLTAVDLSASMLEKARKNALQRSLDINFIQGDAENLQLPDAHFDVVSSKFL HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHCCCEE LWTLPDPKKALLEWKRVLKKDGMIIAIDGDWYSSGIFLKSIRTVSGLIRSVKERNRHDPF EEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH KNKYQLIKNDLPLYSLKPGRVFGLLNDAGFEEINIERMDSLCLSARKHGSLLDKLDYSHP HHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCC IYFIRAVKK EEEEEEECC >Mature Secondary Structure MMETKEIIRNYWDHRSEIYSTGIVEYSEEERIAWKNMLASKLGGRKRLEILDVGTGPGQL CCCHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH ALMFAEMGHHLTAVDLSASMLEKARKNALQRSLDINFIQGDAENLQLPDAHFDVVSSKFL HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHCCCEE LWTLPDPKKALLEWKRVLKKDGMIIAIDGDWYSSGIFLKSIRTVSGLIRSVKERNRHDPF EEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH KNKYQLIKNDLPLYSLKPGRVFGLLNDAGFEEINIERMDSLCLSARKHGSLLDKLDYSHP HHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCC IYFIRAVKK EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA