Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227309

Identifier: 21227309

GI number: 21227309

Start: 1431291

End: 1431917

Strand: Direct

Name: 21227309

Synonym: MM_1207

Alternate gene names: NA

Gene position: 1431291-1431917 (Clockwise)

Preceding gene: 21227308

Following gene: 21227310

Centisome position: 34.94

GC content: 35.57

Gene sequence:

>627_bases
ATGCCCGTTAAAATTTTTGTTTTTGATCAGATCAAAAAACTGATGGGATGGTGCCCGAACGCAAAAAAACTTGAAGCCGT
AAATCAAAATAGCTTTTCTAATTTTGAAGCATATGACCAATCGGGAAAAGAAAAATCAAACGTTTCGAAGGCTTCAGACA
AGCATTCCAGACTTGATATCCAGCTCTTCCTGTTTCCATTTTTCTTTACTCCTATTTATATAAACCTATTCCAAAAAGAT
ATAAATACGGAAGCTTTCCTTCTTGGCCTTTCACTTTCTTTACCGATCTACTTGCTTGGCTGGAAAAAGCAGATGCATCA
ATACAATGCCGTGAAAGAAAAACCTGTTATTTCTCCTTCCTTTAGAAAGACATTAGCTTGTGTCGTCTTATTTCTATTCT
TGGGTATTACTTTGCTTCTGGTTTTCTTGCCTTATATCTCACCTTATTTTTATCTTCTTAACGATCAGACACTGAACTCT
TTTGTTTTGGGAACTCTGATTTTAATATGGGGTTTCTATTTCCAGCTAATTTACTGGGAGAGGAAGAACCATATGAAAAT
ATATATAAAAAGAGAAAATGCACAGCAAAAGCTGTATGTCCTTGAGGAAAAGGGGGGAGAACTATGA

Upstream 100 bases:

>100_bases
ACAGCTAATATACTGGGAAAAAAAGAACCATAAAACAATCTATTTCAACAAAAGTTACGGGACATGGAAGAAATCATACA
TTATTCAGGGGGAAAAATAA

Downstream 100 bases:

>100_bases
TCCGGGAAGCCAGATACATAAAAAAATTGGTGGGCTGGTGTCCCTATGCAAAAACCACCGGATTGGACTCCCGGACTGGT
CCCGCTAATTTTGAAGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDIQLFLFPFFFTPIYINLFQKD
INTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPSFRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNS
FVLGTLILIWGFYFQLIYWERKNHMKIYIKRENAQQKLYVLEEKGGEL

Sequences:

>Translated_208_residues
MPVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDIQLFLFPFFFTPIYINLFQKD
INTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPSFRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNS
FVLGTLILIWGFYFQLIYWERKNHMKIYIKRENAQQKLYVLEEKGGEL
>Mature_207_residues
PVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDIQLFLFPFFFTPIYINLFQKDI
NTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPSFRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNSF
VLGTLILIWGFYFQLIYWERKNHMKIYIKRENAQQKLYVLEEKGGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24436; Mature: 24305

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDI
CCEEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHCCCCCHHHHHHCCCCHHHEEH
QLFLFPFFFTPIYINLFQKDINTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCHH
FRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNSFVLGTLILIWGFYFQLIYWE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEE
RKNHMKIYIKRENAQQKLYVLEEKGGEL
CCCCEEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure 
PVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDI
CEEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHCCCCCHHHHHHCCCCHHHEEH
QLFLFPFFFTPIYINLFQKDINTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCHH
FRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNSFVLGTLILIWGFYFQLIYWE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEE
RKNHMKIYIKRENAQQKLYVLEEKGGEL
CCCCEEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA