| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227309
Identifier: 21227309
GI number: 21227309
Start: 1431291
End: 1431917
Strand: Direct
Name: 21227309
Synonym: MM_1207
Alternate gene names: NA
Gene position: 1431291-1431917 (Clockwise)
Preceding gene: 21227308
Following gene: 21227310
Centisome position: 34.94
GC content: 35.57
Gene sequence:
>627_bases ATGCCCGTTAAAATTTTTGTTTTTGATCAGATCAAAAAACTGATGGGATGGTGCCCGAACGCAAAAAAACTTGAAGCCGT AAATCAAAATAGCTTTTCTAATTTTGAAGCATATGACCAATCGGGAAAAGAAAAATCAAACGTTTCGAAGGCTTCAGACA AGCATTCCAGACTTGATATCCAGCTCTTCCTGTTTCCATTTTTCTTTACTCCTATTTATATAAACCTATTCCAAAAAGAT ATAAATACGGAAGCTTTCCTTCTTGGCCTTTCACTTTCTTTACCGATCTACTTGCTTGGCTGGAAAAAGCAGATGCATCA ATACAATGCCGTGAAAGAAAAACCTGTTATTTCTCCTTCCTTTAGAAAGACATTAGCTTGTGTCGTCTTATTTCTATTCT TGGGTATTACTTTGCTTCTGGTTTTCTTGCCTTATATCTCACCTTATTTTTATCTTCTTAACGATCAGACACTGAACTCT TTTGTTTTGGGAACTCTGATTTTAATATGGGGTTTCTATTTCCAGCTAATTTACTGGGAGAGGAAGAACCATATGAAAAT ATATATAAAAAGAGAAAATGCACAGCAAAAGCTGTATGTCCTTGAGGAAAAGGGGGGAGAACTATGA
Upstream 100 bases:
>100_bases ACAGCTAATATACTGGGAAAAAAAGAACCATAAAACAATCTATTTCAACAAAAGTTACGGGACATGGAAGAAATCATACA TTATTCAGGGGGAAAAATAA
Downstream 100 bases:
>100_bases TCCGGGAAGCCAGATACATAAAAAAATTGGTGGGCTGGTGTCCCTATGCAAAAACCACCGGATTGGACTCCCGGACTGGT CCCGCTAATTTTGAAGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDIQLFLFPFFFTPIYINLFQKD INTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPSFRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNS FVLGTLILIWGFYFQLIYWERKNHMKIYIKRENAQQKLYVLEEKGGEL
Sequences:
>Translated_208_residues MPVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDIQLFLFPFFFTPIYINLFQKD INTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPSFRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNS FVLGTLILIWGFYFQLIYWERKNHMKIYIKRENAQQKLYVLEEKGGEL >Mature_207_residues PVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDIQLFLFPFFFTPIYINLFQKDI NTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPSFRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNSF VLGTLILIWGFYFQLIYWERKNHMKIYIKRENAQQKLYVLEEKGGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24436; Mature: 24305
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDI CCEEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHCCCCCHHHHHHCCCCHHHEEH QLFLFPFFFTPIYINLFQKDINTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPS HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCHH FRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNSFVLGTLILIWGFYFQLIYWE HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEE RKNHMKIYIKRENAQQKLYVLEEKGGEL CCCCEEEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure PVKIFVFDQIKKLMGWCPNAKKLEAVNQNSFSNFEAYDQSGKEKSNVSKASDKHSRLDI CEEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHCCCCCHHHHHHCCCCHHHEEH QLFLFPFFFTPIYINLFQKDINTEAFLLGLSLSLPIYLLGWKKQMHQYNAVKEKPVISPS HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCHH FRKTLACVVLFLFLGITLLLVFLPYISPYFYLLNDQTLNSFVLGTLILIWGFYFQLIYWE HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEE RKNHMKIYIKRENAQQKLYVLEEKGGEL CCCCEEEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA