| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227308
Identifier: 21227308
GI number: 21227308
Start: 1430673
End: 1431290
Strand: Direct
Name: 21227308
Synonym: MM_1206
Alternate gene names: NA
Gene position: 1430673-1431290 (Clockwise)
Preceding gene: 21227307
Following gene: 21227309
Centisome position: 34.93
GC content: 33.17
Gene sequence:
>618_bases GTGAACCTTAATACTGAATACATTAAAAAACTGATGGGATGGTGCCCTAACACAAAAACAAATGAAGCAAGACGACATTT TAACATTGAGAGCTTTGATTCCAATGTTCCTGACAGAGAAAAGGGAGAAAACGAAGATCTGAAACCCCCTGAATGGTTCC GAAAAACGCGTATCCAAACCCTTTTAATTAACACATTCTTCACATTTGCTTATTTTCTTGTAATCAATCAACTGGGAATA AATCTAACTCTGGGTGTAAATTTCATCCATTTACTTGTCGGACTTTTCATTGTCCTGTTTATAGTTATATTTGACTGGAA AAAACAAATGCGAAGATATGATGCTCTGGTGAAATGTCCGGTAGTTGACTATTCAGATAAGAAAATAATGTATTACATAC TTGGATACTTATTTTTGATTTTGATATATCTTCTTTATATTAAAGGATATGAACCTTCACTACAGGCAATATTTTCATTT GCGGGTGGTTTAATTGTAGGAATGTGGCTTAGCTATTTACAGCTAATATACTGGGAAAAAAAGAACCATAAAACAATCTA TTTCAACAAAAGTTACGGGACATGGAAGAAATCATACATTATTCAGGGGGAAAAATAA
Upstream 100 bases:
>100_bases CGGATGTATACTGGGAGAAGAAAAATCATATGAAAATTTATATAATATTTGAAAATAGCCTCGAAAAGATATATGCTATT GGGGAAAAGGAGGGGAAACT
Downstream 100 bases:
>100_bases ATGCCCGTTAAAATTTTTGTTTTTGATCAGATCAAAAAACTGATGGGATGGTGCCCGAACGCAAAAAAACTTGAAGCCGT AAATCAAAATAGCTTTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQTLLINTFFTFAYFLVINQLGI NLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCPVVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSF AGGLIVGMWLSYLQLIYWEKKNHKTIYFNKSYGTWKKSYIIQGEK
Sequences:
>Translated_205_residues MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQTLLINTFFTFAYFLVINQLGI NLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCPVVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSF AGGLIVGMWLSYLQLIYWEKKNHKTIYFNKSYGTWKKSYIIQGEK >Mature_205_residues MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQTLLINTFFTFAYFLVINQLGI NLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCPVVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSF AGGLIVGMWLSYLQLIYWEKKNHKTIYFNKSYGTWKKSYIIQGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24469; Mature: 24469
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQT CCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH LLINTFFTFAYFLVINQLGINLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCP HHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSFAGGLIVGMWLSYLQLIYWEK CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KNHKTIYFNKSYGTWKKSYIIQGEK CCCEEEEEECCCCCHHHCEEEECCC >Mature Secondary Structure MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQT CCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH LLINTFFTFAYFLVINQLGINLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCP HHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSFAGGLIVGMWLSYLQLIYWEK CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KNHKTIYFNKSYGTWKKSYIIQGEK CCCEEEEEECCCCCHHHCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA