Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227308

Identifier: 21227308

GI number: 21227308

Start: 1430673

End: 1431290

Strand: Direct

Name: 21227308

Synonym: MM_1206

Alternate gene names: NA

Gene position: 1430673-1431290 (Clockwise)

Preceding gene: 21227307

Following gene: 21227309

Centisome position: 34.93

GC content: 33.17

Gene sequence:

>618_bases
GTGAACCTTAATACTGAATACATTAAAAAACTGATGGGATGGTGCCCTAACACAAAAACAAATGAAGCAAGACGACATTT
TAACATTGAGAGCTTTGATTCCAATGTTCCTGACAGAGAAAAGGGAGAAAACGAAGATCTGAAACCCCCTGAATGGTTCC
GAAAAACGCGTATCCAAACCCTTTTAATTAACACATTCTTCACATTTGCTTATTTTCTTGTAATCAATCAACTGGGAATA
AATCTAACTCTGGGTGTAAATTTCATCCATTTACTTGTCGGACTTTTCATTGTCCTGTTTATAGTTATATTTGACTGGAA
AAAACAAATGCGAAGATATGATGCTCTGGTGAAATGTCCGGTAGTTGACTATTCAGATAAGAAAATAATGTATTACATAC
TTGGATACTTATTTTTGATTTTGATATATCTTCTTTATATTAAAGGATATGAACCTTCACTACAGGCAATATTTTCATTT
GCGGGTGGTTTAATTGTAGGAATGTGGCTTAGCTATTTACAGCTAATATACTGGGAAAAAAAGAACCATAAAACAATCTA
TTTCAACAAAAGTTACGGGACATGGAAGAAATCATACATTATTCAGGGGGAAAAATAA

Upstream 100 bases:

>100_bases
CGGATGTATACTGGGAGAAGAAAAATCATATGAAAATTTATATAATATTTGAAAATAGCCTCGAAAAGATATATGCTATT
GGGGAAAAGGAGGGGAAACT

Downstream 100 bases:

>100_bases
ATGCCCGTTAAAATTTTTGTTTTTGATCAGATCAAAAAACTGATGGGATGGTGCCCGAACGCAAAAAAACTTGAAGCCGT
AAATCAAAATAGCTTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQTLLINTFFTFAYFLVINQLGI
NLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCPVVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSF
AGGLIVGMWLSYLQLIYWEKKNHKTIYFNKSYGTWKKSYIIQGEK

Sequences:

>Translated_205_residues
MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQTLLINTFFTFAYFLVINQLGI
NLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCPVVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSF
AGGLIVGMWLSYLQLIYWEKKNHKTIYFNKSYGTWKKSYIIQGEK
>Mature_205_residues
MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQTLLINTFFTFAYFLVINQLGI
NLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCPVVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSF
AGGLIVGMWLSYLQLIYWEKKNHKTIYFNKSYGTWKKSYIIQGEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24469; Mature: 24469

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQT
CCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LLINTFFTFAYFLVINQLGINLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCP
HHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSFAGGLIVGMWLSYLQLIYWEK
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNHKTIYFNKSYGTWKKSYIIQGEK
CCCEEEEEECCCCCHHHCEEEECCC
>Mature Secondary Structure
MNLNTEYIKKLMGWCPNTKTNEARRHFNIESFDSNVPDREKGENEDLKPPEWFRKTRIQT
CCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LLINTFFTFAYFLVINQLGINLTLGVNFIHLLVGLFIVLFIVIFDWKKQMRRYDALVKCP
HHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VVDYSDKKIMYYILGYLFLILIYLLYIKGYEPSLQAIFSFAGGLIVGMWLSYLQLIYWEK
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNHKTIYFNKSYGTWKKSYIIQGEK
CCCEEEEEECCCCCHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA