| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227305
Identifier: 21227305
GI number: 21227305
Start: 1428363
End: 1428779
Strand: Reverse
Name: 21227305
Synonym: MM_1203
Alternate gene names: NA
Gene position: 1428779-1428363 (Counterclockwise)
Preceding gene: 21227313
Following gene: 21227300
Centisome position: 34.88
GC content: 41.25
Gene sequence:
>417_bases ATGAGAAGCTTTCGAAGAAGTCTAATGCTCTGGATTTCCCTTATGGTACTGATACTTGTATCGCTGTTTGTAGTTGTTCC CTATATCCTGGTCGGGCCTCCTACTCCTCTTTTCTACGTCCGAAACCACGATGTCGGAGTTCACGAGCTCAGAGTAGAAG TCTGCGACTTAAAAAATAATTCCATACTCGATAAAACATACGAACTTTCAGCAGGAGAGGAAATCTATTATGCCAAACCT TTCAGGTTCCTTGTTCCAGAGTTTGAAGGTGAGGGTTATACATTCGAATTTACACTTGATAACAGTTTTAAGGAAACACA TAGTACGAACATTCAGCCCTGGAACACAGTTCACGTAGAACTATACTCTGATTATGAGGAAGGTCAACCTCTTCTAGTAG GAGAAATGACCGTCTAA
Upstream 100 bases:
>100_bases GTTTCTTTGAATGGAGGAAGAAGATTTCTATATAAATAACATTTATGATTTTTCTTTTGATTCAAATTTGATATGAGACT GAACAATAAGGCTGAATTTT
Downstream 100 bases:
>100_bases GGTCCATTTCAGGTTTGTTTCAGCAAATATAAGCATGTTTTTAAGGACTCTCCAACGCCCGAAAAAATTCAGATGAATAA AGGAATAAAACTTTGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRSFRRSLMLWISLMVLILVSLFVVVPYILVGPPTPLFYVRNHDVGVHELRVEVCDLKNNSILDKTYELSAGEEIYYAKP FRFLVPEFEGEGYTFEFTLDNSFKETHSTNIQPWNTVHVELYSDYEEGQPLLVGEMTV
Sequences:
>Translated_138_residues MRSFRRSLMLWISLMVLILVSLFVVVPYILVGPPTPLFYVRNHDVGVHELRVEVCDLKNNSILDKTYELSAGEEIYYAKP FRFLVPEFEGEGYTFEFTLDNSFKETHSTNIQPWNTVHVELYSDYEEGQPLLVGEMTV >Mature_138_residues MRSFRRSLMLWISLMVLILVSLFVVVPYILVGPPTPLFYVRNHDVGVHELRVEVCDLKNNSILDKTYELSAGEEIYYAKP FRFLVPEFEGEGYTFEFTLDNSFKETHSTNIQPWNTVHVELYSDYEEGQPLLVGEMTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16071; Mature: 16071
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFRRSLMLWISLMVLILVSLFVVVPYILVGPPTPLFYVRNHDVGVHELRVEVCDLKNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEEEEEECCCCC SILDKTYELSAGEEIYYAKPFRFLVPEFEGEGYTFEFTLDNSFKETHSTNIQPWNTVHVE CCCCEEEECCCCCEEEEECCEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCCCCEEEEE LYSDYEEGQPLLVGEMTV EEECCCCCCCEEEEEECC >Mature Secondary Structure MRSFRRSLMLWISLMVLILVSLFVVVPYILVGPPTPLFYVRNHDVGVHELRVEVCDLKNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEEEEEECCCCC SILDKTYELSAGEEIYYAKPFRFLVPEFEGEGYTFEFTLDNSFKETHSTNIQPWNTVHVE CCCCEEEECCCCCEEEEECCEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCCCCEEEEE LYSDYEEGQPLLVGEMTV EEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA