| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227313
Identifier: 21227313
GI number: 21227313
Start: 1433989
End: 1434459
Strand: Reverse
Name: 21227313
Synonym: MM_1211
Alternate gene names: NA
Gene position: 1434459-1433989 (Counterclockwise)
Preceding gene: 21227314
Following gene: 21227305
Centisome position: 35.02
GC content: 43.74
Gene sequence:
>471_bases ATGAAAGACGGGAATAACACAAACGAAAAAGAAACAGAATATCTAAGTTATCAGGAACGTAACAAACTCCTCTGGAGACT CAGGAGTGACTTTGCCTGGGCAGGAAAGAAAATCCCTGAAATTGTAGAGATAGATAATGAGGAGTACATGCTGCGCGATA TGATTGAGGAACTTGGAGAAATAGATCTGCTCAGTCCGGATGAAATCGCCGAAATCAGGGCTCTTATCCCTAAACTTCAA GAAAAGGCAAAAGTCAATGAAGAACTGCTCGAAACAGAAGAACTCACAGTGGCAGAAGCAGAAGCTCTCTGTGAAGAAGC AACCGGGATTTTGCGGGCAGCAATGGACCTTAAGGACAGGCTTGAAGGAAAAATCGGAGAAAAGGGAGCCTCCGAATTCA AGCGTATGCTCAACACCCAGAAGCTTGTAGATGAAAAGCGCTGGCAGGAACTTATTAAAAGCTTGAAATGA
Upstream 100 bases:
>100_bases CTTTAAATCCAGATTGAAGCTTTTTTCGGGACAGAATCGAAAAGAATATGAGATCGGGGTAATAAACCATAAATAAGTCT GGATTTGAGGGAAAGAGATC
Downstream 100 bases:
>100_bases TTAGTTTTTTTTCTGTATTCAATGTGAATTTCCAGGGGAAACATCTTCTCCAGTAACAGCCCATAAATTTTCTAATATAT TTACTAAATACCATCTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKDGNNTNEKETEYLSYQERNKLLWRLRSDFAWAGKKIPEIVEIDNEEYMLRDMIEELGEIDLLSPDEIAEIRALIPKLQ EKAKVNEELLETEELTVAEAEALCEEATGILRAAMDLKDRLEGKIGEKGASEFKRMLNTQKLVDEKRWQELIKSLK
Sequences:
>Translated_156_residues MKDGNNTNEKETEYLSYQERNKLLWRLRSDFAWAGKKIPEIVEIDNEEYMLRDMIEELGEIDLLSPDEIAEIRALIPKLQ EKAKVNEELLETEELTVAEAEALCEEATGILRAAMDLKDRLEGKIGEKGASEFKRMLNTQKLVDEKRWQELIKSLK >Mature_156_residues MKDGNNTNEKETEYLSYQERNKLLWRLRSDFAWAGKKIPEIVEIDNEEYMLRDMIEELGEIDLLSPDEIAEIRALIPKLQ EKAKVNEELLETEELTVAEAEALCEEATGILRAAMDLKDRLEGKIGEKGASEFKRMLNTQKLVDEKRWQELIKSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18142; Mature: 18142
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDGNNTNEKETEYLSYQERNKLLWRLRSDFAWAGKKIPEIVEIDNEEYMLRDMIEELGE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCC IDLLSPDEIAEIRALIPKLQEKAKVNEELLETEELTVAEAEALCEEATGILRAAMDLKDR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGKIGEKGASEFKRMLNTQKLVDEKRWQELIKSLK HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKDGNNTNEKETEYLSYQERNKLLWRLRSDFAWAGKKIPEIVEIDNEEYMLRDMIEELGE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCC IDLLSPDEIAEIRALIPKLQEKAKVNEELLETEELTVAEAEALCEEATGILRAAMDLKDR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGKIGEKGASEFKRMLNTQKLVDEKRWQELIKSLK HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA