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The map label for this gene is sufB [C]

Identifier: 21227190

GI number: 21227190

Start: 1280392

End: 1281615

Strand: Direct

Name: sufB [C]

Synonym: MM_1088

Alternate gene names: 21227190

Gene position: 1280392-1281615 (Clockwise)

Preceding gene: 21227189

Following gene: 21227191

Centisome position: 31.26

GC content: 47.22

Gene sequence:

>1224_bases
ATGCAGACTGAACAGGTGAGCCTTAAAAAAAGAGCCGAGAGCGCAGCTGAGAAGAAAGCGGCTTTCGGAGAGGACTTTGA
ACTGGAAAAATACGAAGAAGGTTCTAAGGTCAGCAAACCAATTGAAGACCTCCAGTCTCTTGATGAAGAAAGCAAAAAGA
CACTGCTCCAGGTAGGGGTGATCCCGAGCGAAGAAGGCAGGTCAGGAAGTTTTCTGGTACTGGATAATGCGGTTTCTCAC
TCAACCCTTAAAGATAAAAACGTGGAGCTGATGTCAACCCACAAGGCTATGGAAAAATACGAATGGCTTAAAGATTACTC
CTGGAAACTTGTTCAGGTGGATGCCGACAAATACACCGCAAAAACCTATCTGGAAGACGCTGACGGTTATTTTATCAGAG
TGCCTGCGGGAAAGAAAACCTCCATGCCTGTCCAGACATGCCTTATGCTGGGAAGCAAAAAGGCAGCCCAGACAGTACAT
AACATCATAATTGTTGAGGAAGGGGCGACTCTTGACATAATAACGGGGTGTACAACTAAAAAAGGAGTTGAAGAAGGTCT
GCACCTTGGGATTTCCGAGATGTACATAAAGAAAGGCGGCACCCTGAATTTTACAATGATCCACAACTGGGCAGAACAGA
TAGGAGTCCGCCCGAGAACGGTTGTGAGTGTTGAAGAAGGCGGGACTTATGTCAGTAATTATATTTGCTTAAAGCCCGTG
CGCTCTGTACAGACGTACCCGACTGTCAGGCTCGAAGGAGAGGGGGCGGTAACCAGGCTCAATACCATAGCAATTGCGCA
CCCGGGTTCCGAGCTTGACCTTGGGAGCAAAGCTATTTTTAATGCCCCGGGTACAAGAGCAGAGCTGATTTCAAGAACAA
TTACCATAGGCGGAAGACTGATTGCACGTGGAGAAATGATAGGAAACGCAAAGGGTGCAAAAGGTCACCTCGAATGTAAA
GGTCTTGTCCTTACCGATAAAGGCAGCCAGCTTGCAATCCCTATACTGGAGGCAAATGTGGACGACATAGAGCTTACTCA
TGAGGCAGCCGTTGGAAAAATTGCTAAAGACCAGGTGGAATACCTGATGGCAAGAGGGCTTACCGAGGATGAAGCAGTCG
GAATGATCATAAGAGGCTTCCTGGACGTGGGTATAAGGGGAATCCCGGAAGAGCTTAAGGAAGAAATAGAAAACACGATT
GCACAGACAGCTCTTGGAATGTAA

Upstream 100 bases:

>100_bases
ACCGGGGATATATCCTCTGCAACGGCACGGTTATGTGTTCGGGGAATCCTATGAAAATGCTTGAAGAGATTAAAAACAAA
GGGTACCAGGAGTGTATAAC

Downstream 100 bases:

>100_bases
TTTCTGCAGGCCGGGGGACTTCTGAGTCTCCCCGGAAAAACTTCTCTGAAAAAGCCTTAGGAAAAAGATCGAACTGCCGG
GAGGGGAAGAGGCAGCCGCT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MQTEQVSLKKRAESAAEKKAAFGEDFELEKYEEGSKVSKPIEDLQSLDEESKKTLLQVGVIPSEEGRSGSFLVLDNAVSH
STLKDKNVELMSTHKAMEKYEWLKDYSWKLVQVDADKYTAKTYLEDADGYFIRVPAGKKTSMPVQTCLMLGSKKAAQTVH
NIIIVEEGATLDIITGCTTKKGVEEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVSVEEGGTYVSNYICLKPV
RSVQTYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAIFNAPGTRAELISRTITIGGRLIARGEMIGNAKGAKGHLECK
GLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVEYLMARGLTEDEAVGMIIRGFLDVGIRGIPEELKEEIENTI
AQTALGM

Sequences:

>Translated_407_residues
MQTEQVSLKKRAESAAEKKAAFGEDFELEKYEEGSKVSKPIEDLQSLDEESKKTLLQVGVIPSEEGRSGSFLVLDNAVSH
STLKDKNVELMSTHKAMEKYEWLKDYSWKLVQVDADKYTAKTYLEDADGYFIRVPAGKKTSMPVQTCLMLGSKKAAQTVH
NIIIVEEGATLDIITGCTTKKGVEEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVSVEEGGTYVSNYICLKPV
RSVQTYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAIFNAPGTRAELISRTITIGGRLIARGEMIGNAKGAKGHLECK
GLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVEYLMARGLTEDEAVGMIIRGFLDVGIRGIPEELKEEIENTI
AQTALGM
>Mature_407_residues
MQTEQVSLKKRAESAAEKKAAFGEDFELEKYEEGSKVSKPIEDLQSLDEESKKTLLQVGVIPSEEGRSGSFLVLDNAVSH
STLKDKNVELMSTHKAMEKYEWLKDYSWKLVQVDADKYTAKTYLEDADGYFIRVPAGKKTSMPVQTCLMLGSKKAAQTVH
NIIIVEEGATLDIITGCTTKKGVEEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVSVEEGGTYVSNYICLKPV
RSVQTYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAIFNAPGTRAELISRTITIGGRLIARGEMIGNAKGAKGHLECK
GLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVEYLMARGLTEDEAVGMIIRGFLDVGIRGIPEELKEEIENTI
AQTALGM

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=381, Percent_Identity=22.5721784776903, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 44429; Mature: 44429

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTEQVSLKKRAESAAEKKAAFGEDFELEKYEEGSKVSKPIEDLQSLDEESKKTLLQVGV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEC
IPSEEGRSGSFLVLDNAVSHSTLKDKNVELMSTHKAMEKYEWLKDYSWKLVQVDADKYTA
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH
KTYLEDADGYFIRVPAGKKTSMPVQTCLMLGSKKAAQTVHNIIIVEEGATLDIITGCTTK
HHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHEEEEEECCCEEEEEECCCCH
KGVEEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVSVEEGGTYVSNYICLKPV
HHHHHHHHCCHHHHHEECCCEEEEEEEHHHHHHHCCCCEEEEEEECCCCEEECEEEECCH
RSVQTYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAIFNAPGTRAELISRTITIGGRL
HHHCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHEECCEE
IARGEMIGNAKGAKGHLECKGLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVE
EEECCEECCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHH
YLMARGLTEDEAVGMIIRGFLDVGIRGIPEELKEEIENTIAQTALGM
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTEQVSLKKRAESAAEKKAAFGEDFELEKYEEGSKVSKPIEDLQSLDEESKKTLLQVGV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEC
IPSEEGRSGSFLVLDNAVSHSTLKDKNVELMSTHKAMEKYEWLKDYSWKLVQVDADKYTA
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH
KTYLEDADGYFIRVPAGKKTSMPVQTCLMLGSKKAAQTVHNIIIVEEGATLDIITGCTTK
HHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHEEEEEECCCEEEEEECCCCH
KGVEEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVSVEEGGTYVSNYICLKPV
HHHHHHHHCCHHHHHEECCCEEEEEEEHHHHHHHCCCCEEEEEEECCCCEEECEEEECCH
RSVQTYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAIFNAPGTRAELISRTITIGGRL
HHHCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHEECCEE
IARGEMIGNAKGAKGHLECKGLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVE
EEECCEECCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHH
YLMARGLTEDEAVGMIIRGFLDVGIRGIPEELKEEIENTIAQTALGM
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]