Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227191

Identifier: 21227191

GI number: 21227191

Start: 1282330

End: 1282635

Strand: Direct

Name: 21227191

Synonym: MM_1089

Alternate gene names: NA

Gene position: 1282330-1282635 (Clockwise)

Preceding gene: 21227190

Following gene: 21227192

Centisome position: 31.3

GC content: 48.04

Gene sequence:

>306_bases
ATGGTCGAAGAAAAGGGCAGAGTTTTAAAAGAAAAAAGTTTGAAGAAAACCCCAACAGGCATAAGCGGTCTGGATGATAT
AACTTATGGGGGACTGCCTGAGGGGCGCACGACCCTGGTGTATGGAAGTGCGGGTTCGGGAAAGATTCTTATGGCTATGG
AATTCCTGGTTAAAGGAGCAGAAAATTACGGCGAGCCGGGGGTATTCATGGCTTTTGAGGAGACCGCTGAGGATCTGGCA
GAGAATTTTGCCTCTCTGGGATTCAATCTGGATAGCCTGGAAGCCAGAAACAAGCTAGTGTCATGA

Upstream 100 bases:

>100_bases
ACAGCATTACATAGCTTAATTTTCAATGCTGAAAGACTTAATGGAAAATAAGAATTTATAGTAATGTATTTTATGCACCA
GAGAGTGAGAAGGGGAATTA

Downstream 100 bases:

>100_bases
CAATTTAATTATTGAGCATAATTTATAGTATTTCTATGTCAATACATAACGATTCTTAACTTATAAAATGACCAAAGACT
AAATGTTCATGACACTAGTA

Product: putative DNA integration/recombination/invertion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MVEEKGRVLKEKSLKKTPTGISGLDDITYGGLPEGRTTLVYGSAGSGKILMAMEFLVKGAENYGEPGVFMAFEETAEDLA
ENFASLGFNLDSLEARNKLVS

Sequences:

>Translated_101_residues
MVEEKGRVLKEKSLKKTPTGISGLDDITYGGLPEGRTTLVYGSAGSGKILMAMEFLVKGAENYGEPGVFMAFEETAEDLA
ENFASLGFNLDSLEARNKLVS
>Mature_101_residues
MVEEKGRVLKEKSLKKTPTGISGLDDITYGGLPEGRTTLVYGSAGSGKILMAMEFLVKGAENYGEPGVFMAFEETAEDLA
ENFASLGFNLDSLEARNKLVS

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 10838; Mature: 10838

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEEKGRVLKEKSLKKTPTGISGLDDITYGGLPEGRTTLVYGSAGSGKILMAMEFLVKGA
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
ENYGEPGVFMAFEETAEDLAENFASLGFNLDSLEARNKLVS
HCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MVEEKGRVLKEKSLKKTPTGISGLDDITYGGLPEGRTTLVYGSAGSGKILMAMEFLVKGA
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
ENYGEPGVFMAFEETAEDLAENFASLGFNLDSLEARNKLVS
HCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]