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The map label for this gene is sufC [C]

Identifier: 21227189

GI number: 21227189

Start: 1279667

End: 1280410

Strand: Direct

Name: sufC [C]

Synonym: MM_1087

Alternate gene names: 21227189

Gene position: 1279667-1280410 (Clockwise)

Preceding gene: 21227188

Following gene: 21227190

Centisome position: 31.24

GC content: 47.85

Gene sequence:

>744_bases
ATGCTAAAAATAGAAGACCTGACTGTAGAGGTCAACGGAAAAATCTTACTCCATGATGTGAACCTCGAGGTTGAGAAAGG
GTACACAAATGTACTTTTCGGACCAAACGGAGCCGGGAAGTCTGCCCTCATGAGGACGATTATGGGTTTCAGCGAGTACA
AGGTTTTGAAAGGCAGGATACTGTTCAATGGAGAGGACATTACTCACCTTCCAGTGGATGAAAGAGCCCGCCGCGGGCTT
GGTATTATGATGCAGCGTCCGCCCGATATGACAGGGATTAAACTCGGGGACCTTGTAAAAGTAACATCAAAAGGAAAGAA
AGACCCTGAAGCACTTGCAGAAAACCTTGATATGAAGCGTTTTCTCGACAGGGATGTGAACGTTGGTTTTTCAGGAGGGG
AGATTAAACGCTCCGAACTTCTCCAGCTTGCAGCCCAGAACCCGACGCTCTATCTTCTGGACGAGCCCGAATCCGGAGTG
GATCTCGTGAGTATCGAGCAGGTAGGGATGACAATAAAAGAACTGCTTGCCGAAGGGTTGGAATGCCCAGGAGAGAGATG
CACGAAAGGTAAATCGGCTCTTATTATTACACACACAGGCCAGGTTCTGGACTATGTGCAGGCAGACCGGGGATATATCC
TCTGCAACGGCACGGTTATGTGTTCGGGGAATCCTATGAAAATGCTTGAAGAGATTAAAAACAAAGGGTACCAGGAGTGT
ATAACATGCAGACTGAACAGGTGA

Upstream 100 bases:

>100_bases
CCAGATAGAACTAAGTGGACTCACTCTAAACGGCTATTTCTCAGGATACGAAGAAAATCGGGGAAACCGTATCCGGAAAG
AGATAAAGGGAGAAAATACC

Downstream 100 bases:

>100_bases
GCCTTAAAAAAAGAGCCGAGAGCGCAGCTGAGAAGAAAGCGGCTTTCGGAGAGGACTTTGAACTGGAAAAATACGAAGAA
GGTTCTAAGGTCAGCAAACC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLKIEDLTVEVNGKILLHDVNLEVEKGYTNVLFGPNGAGKSALMRTIMGFSEYKVLKGRILFNGEDITHLPVDERARRGL
GIMMQRPPDMTGIKLGDLVKVTSKGKKDPEALAENLDMKRFLDRDVNVGFSGGEIKRSELLQLAAQNPTLYLLDEPESGV
DLVSIEQVGMTIKELLAEGLECPGERCTKGKSALIITHTGQVLDYVQADRGYILCNGTVMCSGNPMKMLEEIKNKGYQEC
ITCRLNR

Sequences:

>Translated_247_residues
MLKIEDLTVEVNGKILLHDVNLEVEKGYTNVLFGPNGAGKSALMRTIMGFSEYKVLKGRILFNGEDITHLPVDERARRGL
GIMMQRPPDMTGIKLGDLVKVTSKGKKDPEALAENLDMKRFLDRDVNVGFSGGEIKRSELLQLAAQNPTLYLLDEPESGV
DLVSIEQVGMTIKELLAEGLECPGERCTKGKSALIITHTGQVLDYVQADRGYILCNGTVMCSGNPMKMLEEIKNKGYQEC
ITCRLNR
>Mature_247_residues
MLKIEDLTVEVNGKILLHDVNLEVEKGYTNVLFGPNGAGKSALMRTIMGFSEYKVLKGRILFNGEDITHLPVDERARRGL
GIMMQRPPDMTGIKLGDLVKVTSKGKKDPEALAENLDMKRFLDRDVNVGFSGGEIKRSELLQLAAQNPTLYLLDEPESGV
DLVSIEQVGMTIKELLAEGLECPGERCTKGKSALIITHTGQVLDYVQADRGYILCNGTVMCSGNPMKMLEEIKNKGYQEC
ITCRLNR

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=254, Percent_Identity=31.8897637795276, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=28.0334728033473, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787029, Length=251, Percent_Identity=26.2948207171315, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1790739, Length=247, Percent_Identity=28.3400809716599, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786803, Length=173, Percent_Identity=28.3236994219653, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081791, Length=249, Percent_Identity=26.5060240963855, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=237, Percent_Identity=25.7383966244726, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=24.3801652892562, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=27.4261603375527, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27318; Mature: 27318

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIEDLTVEVNGKILLHDVNLEVEKGYTNVLFGPNGAGKSALMRTIMGFSEYKVLKGRI
CEEEEEEEEEECCEEEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHEEEEEEEE
LFNGEDITHLPVDERARRGLGIMMQRPPDMTGIKLGDLVKVTSKGKKDPEALAENLDMKR
EECCCCEEECCCCHHHHCCCCEEEECCCCCCCEECCCEEEECCCCCCCHHHHHHCCCHHH
FLDRDVNVGFSGGEIKRSELLQLAAQNPTLYLLDEPESGVDLVSIEQVGMTIKELLAEGL
HHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHC
ECPGERCTKGKSALIITHTGQVLDYVQADRGYILCNGTVMCSGNPMKMLEEIKNKGYQEC
CCCHHHCCCCCCEEEEEECCHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHCCHHEE
ITCRLNR
HEEECCC
>Mature Secondary Structure
MLKIEDLTVEVNGKILLHDVNLEVEKGYTNVLFGPNGAGKSALMRTIMGFSEYKVLKGRI
CEEEEEEEEEECCEEEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHEEEEEEEE
LFNGEDITHLPVDERARRGLGIMMQRPPDMTGIKLGDLVKVTSKGKKDPEALAENLDMKR
EECCCCEEECCCCHHHHCCCCEEEECCCCCCCEECCCEEEECCCCCCCHHHHHHCCCHHH
FLDRDVNVGFSGGEIKRSELLQLAAQNPTLYLLDEPESGVDLVSIEQVGMTIKELLAEGL
HHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHC
ECPGERCTKGKSALIITHTGQVLDYVQADRGYILCNGTVMCSGNPMKMLEEIKNKGYQEC
CCCHHHCCCCCCEEEEEECCHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHCCHHEE
ITCRLNR
HEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]