| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227160
Identifier: 21227160
GI number: 21227160
Start: 1240733
End: 1241404
Strand: Direct
Name: 21227160
Synonym: MM_1058
Alternate gene names: NA
Gene position: 1240733-1241404 (Clockwise)
Preceding gene: 21227157
Following gene: 21227161
Centisome position: 30.29
GC content: 43.45
Gene sequence:
>672_bases ATGCTACCCAGACTGGTTATACACAACAGCATAAGCCCTGACGGCTCAACCACTGGTTTTGATGCAAACCTTGATGTTCA CTATGGGATCCTGGGCAGTTACGAACCCGATGCCATGATAGTAGGGTCGAATACCGCAAAGGTGGGGACACAATTTTTTT GCGAAAAGATACCTCCTGAAGATAAAGAAGACTTCAAAAAGCCTGATATCCATCCGGATGATACAAGGGCTTACTGGATG ATCGCAGACTCAAGAGGGACTCTCGAAGGGCTTATGCACGTATTCAGGCGTTCAGAATATAGTAAAGACATAATCGTACT CGTCTCGGAGAAAACCCCTGAATCTTACATAAATTACCTCAAGGAAAGAGATTATGATTTTATCCGGGCAGGGGTGGAAC GTGTGGATGTCAGGCAGGGTCTTGAAATTGCAGGTGAAAGATACGGATTTAAACTTGTGGTTTCAGACAGCGGAGGAATA TTAAACAGTATTTTACTTGAACAGGGACTCGTTGATGAAATAAGTTTGGTCCTGACTCCGGAAATTGTTGGGAAAAGCGG GACGAACCTTTTCAGGGGAATTGAGAAAAGCGGGATTCAACTGGAGCTTTCAAGAAACGAGATTGTGGAAAAGAAATATG TGCACCTTGTTTACAGGGTTTTGAAAGAATAA
Upstream 100 bases:
>100_bases TATATTCCAAGATAGAATAAGTTTATTGAATGTTTGATTTAAGTTAATACAACTTTAATTAAACTATATATGCTTTTAAT TTGGGGGAAGAGGTGAAAAC
Downstream 100 bases:
>100_bases GGATAAGAGCAAAGATAAGGCAGAAAATTATCTCAAGTACGAAAAAACCTGTAGATATAGTTGCAAGTTCGCCAGGGGGA CTTAAAAAGAGCCCATACCG
Product: 5-amino-6-(5-phosphoribosylamino)uracil reductase
Products: 5-amino-6-(5-phosphoribosylamino)uracil; NADPH; H+
Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Bifunctional Deaminase-Reductase Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracilreductase
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MLPRLVIHNSISPDGSTTGFDANLDVHYGILGSYEPDAMIVGSNTAKVGTQFFCEKIPPEDKEDFKKPDIHPDDTRAYWM IADSRGTLEGLMHVFRRSEYSKDIIVLVSEKTPESYINYLKERDYDFIRAGVERVDVRQGLEIAGERYGFKLVVSDSGGI LNSILLEQGLVDEISLVLTPEIVGKSGTNLFRGIEKSGIQLELSRNEIVEKKYVHLVYRVLKE
Sequences:
>Translated_223_residues MLPRLVIHNSISPDGSTTGFDANLDVHYGILGSYEPDAMIVGSNTAKVGTQFFCEKIPPEDKEDFKKPDIHPDDTRAYWM IADSRGTLEGLMHVFRRSEYSKDIIVLVSEKTPESYINYLKERDYDFIRAGVERVDVRQGLEIAGERYGFKLVVSDSGGI LNSILLEQGLVDEISLVLTPEIVGKSGTNLFRGIEKSGIQLELSRNEIVEKKYVHLVYRVLKE >Mature_223_residues MLPRLVIHNSISPDGSTTGFDANLDVHYGILGSYEPDAMIVGSNTAKVGTQFFCEKIPPEDKEDFKKPDIHPDDTRAYWM IADSRGTLEGLMHVFRRSEYSKDIIVLVSEKTPESYINYLKERDYDFIRAGVERVDVRQGLEIAGERYGFKLVVSDSGGI LNSILLEQGLVDEISLVLTPEIVGKSGTNLFRGIEKSGIQLELSRNEIVEKKYVHLVYRVLKE
Specific function: Unknown
COG id: COG1985
COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.1.193
Molecular weight: Translated: 25143; Mature: 25143
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRLVIHNSISPDGSTTGFDANLDVHYGILGSYEPDAMIVGSNTAKVGTQFFCEKIPPE CCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCC DKEDFKKPDIHPDDTRAYWMIADSRGTLEGLMHVFRRSEYSKDIIVLVSEKTPESYINYL CHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH KERDYDFIRAGVERVDVRQGLEIAGERYGFKLVVSDSGGILNSILLEQGLVDEISLVLTP HHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHEEECH EIVGKSGTNLFRGIEKSGIQLELSRNEIVEKKYVHLVYRVLKE HHHCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPRLVIHNSISPDGSTTGFDANLDVHYGILGSYEPDAMIVGSNTAKVGTQFFCEKIPPE CCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCC DKEDFKKPDIHPDDTRAYWMIADSRGTLEGLMHVFRRSEYSKDIIVLVSEKTPESYINYL CHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH KERDYDFIRAGVERVDVRQGLEIAGERYGFKLVVSDSGGILNSILLEQGLVDEISLVLTP HHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHEEECH EIVGKSGTNLFRGIEKSGIQLELSRNEIVEKKYVHLVYRVLKE HHHCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-amino-6-(5-phosphoribitylamino)uracil; NADP+
Specific reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA