Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is mrp [C]

Identifier: 21227092

GI number: 21227092

Start: 1166808

End: 1167716

Strand: Direct

Name: mrp [C]

Synonym: MM_0990

Alternate gene names: 21227092

Gene position: 1166808-1167716 (Clockwise)

Preceding gene: 21227091

Following gene: 21227093

Centisome position: 28.48

GC content: 49.17

Gene sequence:

>909_bases
GTGAAAAAGAGATATAAAAATCCGGAAAAATCTGGAAGTTGCGGAAATTTTATACAGGCGATAAAAATGACAGATAAGGT
TCAACCACTGGAAAGCTTATCAAAAAAGCCCGAGGAACCGAAAATCGTAGTAAACCTCAGGCGCATCAAGCGTAAGATCA
TGGTAATGAGCGGGAAAGGCGGTGTAGGGAAAAGTACGGTTGCCGCAAACCTCGCTGTCGGGCTCGCTCTCCGCGGGCAC
AGGGTAGGTCTTCTTGACTGCGATATTCACGGTCCAACGGTCCCCACGATCTTCGGATTGGAGTCCGCAAGACCTGGAGT
AAGCGAAGAAGGAATTCTCCCGATAGAGGTGCTCCCCAATCTCTCAGTGATGTCTATTGGTTTTCTGCTCGAAAACAAAG
ACTCGCCCATAATCTGGAGGGGGCCCGCCAAAATGGGAGCAATCAAGCAGTTCCTTGAAGAAGTATTCTGGGGAGCACTT
GACTTTTTGATTATCGATCTGCCCCCTGGAACCGGAGACGAGCCTCTGAGTGTGGCACAGCTTATCCCCAACTGTGACGG
TTCCGTACTTGTCACGACACCTCAGGACGTGGCTCTTATAAGTGTTCGGAAATCAATCACATTTTCGGAAAAACTGAATG
TGCCCATAATAGGGCTTGTGGACAACATGCACGGGCTAATCTGCCCCCACTGCGGCAAGCCCATAGAAGTCTTCGGAAGC
GGAGGCGTCGAGAAAGCCTCAAAAGACTTTAATATCCCCATCCTTGCCAGACTTCCCATAGAACCCGGAGTCGCGGAAAT
GGAAGACAGGGGCACGGTTGTTCAGGACCAGCTTAAACACGGCACGGAATGGCAGAAGAATTTTGATAATGTCGTAGACG
CCGTTGAAAAAATACTTGAGAAAGAGTAA

Upstream 100 bases:

>100_bases
CTTGCTCTGAGCACCGGAAAAGCAATAGAAATTAAAGGCGGTAACTATATCAGGATCGAGACTGCTGATACCAATGAAGA
TGCTGACAAGATGCTGACTC

Downstream 100 bases:

>100_bases
GTCAAACTTCTTTGTTTTCTCTTTTTTCCTTATTTTATTTTTATCAGTTCTCTATATATAAAACCCATGTCTGCAACGGG
CCTCTAATATAGTTATTGAT

Product: nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKGGVGKSTVAANLAVGLALRGH
RVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPNLSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGAL
DFLIIDLPPGTGDEPLSVAQLIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS
GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILEKE

Sequences:

>Translated_302_residues
MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKGGVGKSTVAANLAVGLALRGH
RVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPNLSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGAL
DFLIIDLPPGTGDEPLSVAQLIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS
GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILEKE
>Mature_302_residues
MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKGGVGKSTVAANLAVGLALRGH
RVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPNLSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGAL
DFLIIDLPPGTGDEPLSVAQLIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS
GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILEKE

Specific function: Not Known. [C]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]

Homologues:

Organism=Homo sapiens, GI118572611, Length=231, Percent_Identity=49.3506493506493, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI6912540, Length=231, Percent_Identity=39.3939393939394, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI157384956, Length=225, Percent_Identity=41.3333333333333, Blast_Score=172, Evalue=3e-43,
Organism=Escherichia coli, GI87082045, Length=252, Percent_Identity=41.6666666666667, Blast_Score=194, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI25143050, Length=238, Percent_Identity=46.6386554621849, Blast_Score=218, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6322188, Length=229, Percent_Identity=45.4148471615721, Blast_Score=213, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321347, Length=276, Percent_Identity=41.6666666666667, Blast_Score=192, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24667611, Length=241, Percent_Identity=46.0580912863071, Blast_Score=215, Evalue=3e-56,
Organism=Drosophila melanogaster, GI19921440, Length=250, Percent_Identity=42.8, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI221511043, Length=251, Percent_Identity=39.0438247011952, Blast_Score=160, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019591
- InterPro:   IPR000808 [H]

Pfam domain/function: PF10609 ParA [H]

EC number: NA

Molecular weight: Translated: 32782; Mature: 32782

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS01215 MRP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEHHHHCEEEEEEECCC
GVGKSTVAANLAVGLALRGHRVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPN
CCCCHHHHHHHHHEEEECCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCC
LSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGALDFLIIDLPPGTGDEPLSVAQ
CCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH
LIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS
HCCCCCCCEEEECCCCEEEEEEHHHEEEHHCCCCCEEEEECCCCCEECCCCCCCEEEECC
GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILE
CCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC
KE
CC
>Mature Secondary Structure
MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEHHHHCEEEEEEECCC
GVGKSTVAANLAVGLALRGHRVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPN
CCCCHHHHHHHHHEEEECCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCC
LSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGALDFLIIDLPPGTGDEPLSVAQ
CCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH
LIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS
HCCCCCCCEEEECCCCEEEEEEHHHEEEHHCCCCCEEEEECCCCCEECCCCCCCEEEECC
GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILE
CCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC
KE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]