| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is kefC [H]
Identifier: 21227031
GI number: 21227031
Start: 1095109
End: 1097196
Strand: Direct
Name: kefC [H]
Synonym: MM_0929
Alternate gene names: 21227031
Gene position: 1095109-1097196 (Clockwise)
Preceding gene: 21227025
Following gene: 21227036
Centisome position: 26.73
GC content: 42.34
Gene sequence:
>2088_bases ATGGAAGACTATTTGCTGGCAAATGTTGATGTGATTCTCGGCTTTGCAGTCGTAATTCTTACTATATTTTATAGATTTGA ATTCCCTCCGATACTGGGCTTTCTTGTAACCGGGATGCTAATAGGGCCTTACGGTCTTGGAATCCTGAGCGGAGGGGAGA TAGACATGACTTCCGAACTCGGAGTAGTCTTTCTGTTATTTACGATAGGAGTAGACCTCTCCTTAAATGACCTCTGGAAA ATGAAAAAAGCCATAATGGGCGGAGGAGTTCTTCAGATCCTTTTTACAACAACTCTAGCTTTTATTATATGCACATGGAT TGGATTCAGTTCTTCCACATCAATTTTTATAGGGCTCCTGATTTCACTTAGCAGTACCGCAATAGTACTCAAAGTTTTTC AGGACAAAAACGAGGTTGATACCCCACACGGAAAAACTTCACTCGCAATTCTGATCTTTCAGGACCTTGCCATAGTCCCT CTTATTCTTATAACTCCAATACTTGCAGGAAGTTCCATAAGTTTTGATGGAGCTTTTTCCAATATTTTCTTTAAAGGCTC ACTGATCATCTTTGTTTTTATCCTGAGCTCCAGATTTCTGGTCCCCTGGATATTTTACTGTGTAGGCAGGACAGGCAGCA AACAGTTATTCCTTGTCAGTGTTGTTTTTATATGCTTATCCGCAGCAGTCTTTACATCAAGCATTGGCCTCTCTTTAGCC CTTGGAGCTTTTTTAGCCGGGATAGTCATCTCAGGGTCCCAGTACAGCCACCAGGCGATGGGAAATATCCTGCCTTTGAA AGATATGTTCATGAGCTTTTTCTTTGTGTCCATAGGTATGCTTCTTAACATCAGCTACCTGCTTGATCATCTCCCTCTCC TGGCTCTTGCTGCAGTCGCCCTTATTATTATAAAATCAATTGCAGGAATGCTTATCACCATTATTCTTGGATATCCTCTA CGTACAACTATAATTACAGGGCTTGCACTTTCACAGGTGGGAGAGTTCTCATTTGTTCTTTCCAAACTGGGGCTGGAGTA TTCCCTCCTGTCGAAGGAGACTTACCAGGCATTTCTGGCAGTTTCAATCATTACCATGGGAGTTACACCCTTTTTGATCA ATGCCTCTTACAGGCCTGCTGAGTTCTTTGTCAAAAAGGCTTCAGACTCTGTATATGGCATGAAGCTCGTACGTGGCTTT TGCTCAGGTTCCTTTGAATGGAAAGAATGCGTTGAACCTGAGATAAAAGATCATCTTATAATGGTAGGTTTTGGATTTTC CGGAAAAACGATTTCAAAAGCTGCAAAAGCTGCAGGTATTCCATACATCATCCTGGAAACAAACCCCGATATTGTTAAGC AGGAAAAAACAAAGGGTGAAAGAATACAGTACGGAGATGCAACATTCGGGGCTGTCCAGGAACATGCAGGAATCAGGAAC GCAAGAGTGCTCATAACCGGAATATCCGATTCGGTTGCCACAAGAAAAATTGTAGAGAAGGCAAAAGAGTTGAATCCAAA TATCTATGTAATTGCAAAGGTTCGGAACCTGCAGGAAATGAAGCACCTCCATCACCTGGGTGCGGATGAAATTATCCCTG AAGAATACGAAACCTCAGTAGAAATATTTGTCCGCCTTCTCGAAAAGTATCTTGTGCCGAGGGAAAATATTGAAAAGATG ATAAATGACTTGAGAGCTAACGGTTACAGAAGATTGAGAAAACTGTCAGTCGATCAGGATACAGATAATGAATTCAGCAT AAAGGATGAGCTTCCGGGTGTTGAGATCCAGGTTCTTAAAGTGGGGAAAGGGTCAGGTTTTGACGGAAAAACCCTTGCAG AGATGGAATTCAGGAAAAAGCACGGAGTAACAGTACTTTCTGTCCGCAGGGGCTCGGAAATGATTCACACTCCTGAAGGC GATTTCCTTCTCAAAGCAAAAGATGCCTGCGTTCTTCTGGGAAAGCCTGAAAGCCTGCTCAATGTGAGAAAGTTGTTTGA AAGCATCACCGGAGAAGTAAGACCTTCTTTTCAATCCGGGAGTAAAATTGAGCTGATCCCAAAACCGGATTCATTCCCAC ATAACTAA
Upstream 100 bases:
>100_bases TTTTCTAATTTCCAGTTTCAATACACCTTCATGAACTAATTGAGTAGACAATGACATCAATGACATAATTTATTTTTGCG TTTTCCGGGGAGCGAAATAG
Downstream 100 bases:
>100_bases AAGTTCAGAATTACTTAAATATTCAGGAATACAGACAGGCATTTTAAATTCGAGGTTAAGAGAAGTGGACTTAAATTCTG GGACCAGCAACTATTATTGA
Product: glutathione-regulated potassium-efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MEDYLLANVDVILGFAVVILTIFYRFEFPPILGFLVTGMLIGPYGLGILSGGEIDMTSELGVVFLLFTIGVDLSLNDLWK MKKAIMGGGVLQILFTTTLAFIICTWIGFSSSTSIFIGLLISLSSTAIVLKVFQDKNEVDTPHGKTSLAILIFQDLAIVP LILITPILAGSSISFDGAFSNIFFKGSLIIFVFILSSRFLVPWIFYCVGRTGSKQLFLVSVVFICLSAAVFTSSIGLSLA LGAFLAGIVISGSQYSHQAMGNILPLKDMFMSFFFVSIGMLLNISYLLDHLPLLALAAVALIIIKSIAGMLITIILGYPL RTTIITGLALSQVGEFSFVLSKLGLEYSLLSKETYQAFLAVSIITMGVTPFLINASYRPAEFFVKKASDSVYGMKLVRGF CSGSFEWKECVEPEIKDHLIMVGFGFSGKTISKAAKAAGIPYIILETNPDIVKQEKTKGERIQYGDATFGAVQEHAGIRN ARVLITGISDSVATRKIVEKAKELNPNIYVIAKVRNLQEMKHLHHLGADEIIPEEYETSVEIFVRLLEKYLVPRENIEKM INDLRANGYRRLRKLSVDQDTDNEFSIKDELPGVEIQVLKVGKGSGFDGKTLAEMEFRKKHGVTVLSVRRGSEMIHTPEG DFLLKAKDACVLLGKPESLLNVRKLFESITGEVRPSFQSGSKIELIPKPDSFPHN
Sequences:
>Translated_695_residues MEDYLLANVDVILGFAVVILTIFYRFEFPPILGFLVTGMLIGPYGLGILSGGEIDMTSELGVVFLLFTIGVDLSLNDLWK MKKAIMGGGVLQILFTTTLAFIICTWIGFSSSTSIFIGLLISLSSTAIVLKVFQDKNEVDTPHGKTSLAILIFQDLAIVP LILITPILAGSSISFDGAFSNIFFKGSLIIFVFILSSRFLVPWIFYCVGRTGSKQLFLVSVVFICLSAAVFTSSIGLSLA LGAFLAGIVISGSQYSHQAMGNILPLKDMFMSFFFVSIGMLLNISYLLDHLPLLALAAVALIIIKSIAGMLITIILGYPL RTTIITGLALSQVGEFSFVLSKLGLEYSLLSKETYQAFLAVSIITMGVTPFLINASYRPAEFFVKKASDSVYGMKLVRGF CSGSFEWKECVEPEIKDHLIMVGFGFSGKTISKAAKAAGIPYIILETNPDIVKQEKTKGERIQYGDATFGAVQEHAGIRN ARVLITGISDSVATRKIVEKAKELNPNIYVIAKVRNLQEMKHLHHLGADEIIPEEYETSVEIFVRLLEKYLVPRENIEKM INDLRANGYRRLRKLSVDQDTDNEFSIKDELPGVEIQVLKVGKGSGFDGKTLAEMEFRKKHGVTVLSVRRGSEMIHTPEG DFLLKAKDACVLLGKPESLLNVRKLFESITGEVRPSFQSGSKIELIPKPDSFPHN >Mature_695_residues MEDYLLANVDVILGFAVVILTIFYRFEFPPILGFLVTGMLIGPYGLGILSGGEIDMTSELGVVFLLFTIGVDLSLNDLWK MKKAIMGGGVLQILFTTTLAFIICTWIGFSSSTSIFIGLLISLSSTAIVLKVFQDKNEVDTPHGKTSLAILIFQDLAIVP LILITPILAGSSISFDGAFSNIFFKGSLIIFVFILSSRFLVPWIFYCVGRTGSKQLFLVSVVFICLSAAVFTSSIGLSLA LGAFLAGIVISGSQYSHQAMGNILPLKDMFMSFFFVSIGMLLNISYLLDHLPLLALAAVALIIIKSIAGMLITIILGYPL RTTIITGLALSQVGEFSFVLSKLGLEYSLLSKETYQAFLAVSIITMGVTPFLINASYRPAEFFVKKASDSVYGMKLVRGF CSGSFEWKECVEPEIKDHLIMVGFGFSGKTISKAAKAAGIPYIILETNPDIVKQEKTKGERIQYGDATFGAVQEHAGIRN ARVLITGISDSVATRKIVEKAKELNPNIYVIAKVRNLQEMKHLHHLGADEIIPEEYETSVEIFVRLLEKYLVPRENIEKM INDLRANGYRRLRKLSVDQDTDNEFSIKDELPGVEIQVLKVGKGSGFDGKTLAEMEFRKKHGVTVLSVRRGSEMIHTPEG DFLLKAKDACVLLGKPESLLNVRKLFESITGEVRPSFQSGSKIELIPKPDSFPHN
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=372, Percent_Identity=25.8064516129032, Blast_Score=97, Evalue=5e-20, Organism=Escherichia coli, GI1786232, Length=575, Percent_Identity=29.0434782608696, Blast_Score=246, Evalue=4e-66, Organism=Escherichia coli, GI1786685, Length=534, Percent_Identity=30.1498127340824, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1789749, Length=580, Percent_Identity=28.7931034482759, Blast_Score=224, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 76382; Mature: 76382
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDYLLANVDVILGFAVVILTIFYRFEFPPILGFLVTGMLIGPYGLGILSGGEIDMTSEL CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHH GVVFLLFTIGVDLSLNDLWKMKKAIMGGGVLQILFTTTLAFIICTWIGFSSSTSIFIGLL HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ISLSSTAIVLKVFQDKNEVDTPHGKTSLAILIFQDLAIVPLILITPILAGSSISFDGAFS HHHCCHHEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHH NIFFKGSLIIFVFILSSRFLVPWIFYCVGRTGSKQLFLVSVVFICLSAAVFTSSIGLSLA HEEECCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFLAGIVISGSQYSHQAMGNILPLKDMFMSFFFVSIGMLLNISYLLDHLPLLALAAVA HHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIIIKSIAGMLITIILGYPLRTTIITGLALSQVGEFSFVLSKLGLEYSLLSKETYQAFLA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VSIITMGVTPFLINASYRPAEFFVKKASDSVYGMKLVRGFCSGSFEWKECVEPEIKDHLI HHHHHHCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCEE MVGFGFSGKTISKAAKAAGIPYIILETNPDIVKQEKTKGERIQYGDATFGAVQEHAGIRN EEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEECCCHHHHHHHHCCCCC ARVLITGISDSVATRKIVEKAKELNPNIYVIAKVRNLQEMKHLHHLGADEIIPEEYETSV CEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH EIFVRLLEKYLVPRENIEKMINDLRANGYRRLRKLSVDQDTDNEFSIKDELPGVEIQVLK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEE VGKGSGFDGKTLAEMEFRKKHGVTVLSVRRGSEMIHTPEGDFLLKAKDACVLLGKPESLL ECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEECCCEEEECCCHHHH NVRKLFESITGEVRPSFQSGSKIELIPKPDSFPHN HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MEDYLLANVDVILGFAVVILTIFYRFEFPPILGFLVTGMLIGPYGLGILSGGEIDMTSEL CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHH GVVFLLFTIGVDLSLNDLWKMKKAIMGGGVLQILFTTTLAFIICTWIGFSSSTSIFIGLL HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ISLSSTAIVLKVFQDKNEVDTPHGKTSLAILIFQDLAIVPLILITPILAGSSISFDGAFS HHHCCHHEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHH NIFFKGSLIIFVFILSSRFLVPWIFYCVGRTGSKQLFLVSVVFICLSAAVFTSSIGLSLA HEEECCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFLAGIVISGSQYSHQAMGNILPLKDMFMSFFFVSIGMLLNISYLLDHLPLLALAAVA HHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIIIKSIAGMLITIILGYPLRTTIITGLALSQVGEFSFVLSKLGLEYSLLSKETYQAFLA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VSIITMGVTPFLINASYRPAEFFVKKASDSVYGMKLVRGFCSGSFEWKECVEPEIKDHLI HHHHHHCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCEE MVGFGFSGKTISKAAKAAGIPYIILETNPDIVKQEKTKGERIQYGDATFGAVQEHAGIRN EEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEECCCHHHHHHHHCCCCC ARVLITGISDSVATRKIVEKAKELNPNIYVIAKVRNLQEMKHLHHLGADEIIPEEYETSV CEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH EIFVRLLEKYLVPRENIEKMINDLRANGYRRLRKLSVDQDTDNEFSIKDELPGVEIQVLK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEE VGKGSGFDGKTLAEMEFRKKHGVTVLSVRRGSEMIHTPEGDFLLKAKDACVLLGKPESLL ECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEECCCEEEECCCHHHH NVRKLFESITGEVRPSFQSGSKIELIPKPDSFPHN HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA