Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227007

Identifier: 21227007

GI number: 21227007

Start: 1070316

End: 1071272

Strand: Direct

Name: 21227007

Synonym: MM_0905

Alternate gene names: NA

Gene position: 1070316-1071272 (Clockwise)

Preceding gene: 21227006

Following gene: 21227011

Centisome position: 26.13

GC content: 46.5

Gene sequence:

>957_bases
ATGATCAGAATAACCACCCCTTGCAGAATTCATATGACTCTTATTGATATGAATGGAGAAATCGGAAGAGTCGATGGAGG
AGCAGGACTTACCCTTTCATCTCCGAATATAGAGATTACGGCAGAAGAAGCCGAGGAAGTCAGTATTGAAGGTCTTCAGG
ATTTTGCCGATCGAATGGAAAAAGCTGCAAAAACCCTGCTCCCTGAAGGGAAAGGAATCAGGGTCAATGTTGAGGAAGTG
TACCCGGCTCATGTGGGTTTTGGATCAGGAACTCAATCTTCCCTGGCAGTAGCGGCAGCAGTGAATGAACTCTACGGGCT
TGGGAAGAGTGTCAGAGAACTCGCACTCACAGTAAAAAGAGGAGGAACTTCAGGTATAGGAGTAACTGCTTTTGAGAAAG
GAGGGTTTATAGTTGACGGAGGACACAAATTTAAAGATAAGGGAGGATTTATGCCATCGGCTGCAAGCCGCGTACCTCCC
GGTCCAGTTCTCTTCCGGGAGGATTTCCCTGAATGGGATATCCTGTTAGCAATTCCAAATGAGAAAGGAATGCATGACCA
GGAGGAAATTGATACATTCAAAAAATTCTGCCCCCTGCCCATAGAGGAAGTAAGGGAAATTTCCCATGTAGTGCTCATGC
AGATGATGCCTGCCGTAATAGAGGGAGATATTGAGAGTTTCGGAGCTGCAATAAATCATGTCCAGACTGTCGGCTTTAAC
AAGAGGGAGAGCCTTATCTGGCCGGATTTTGTAAAGAATATTGCTTCTTTCCTGCGCAGCCAGTGTTATGGAGCCGGAGT
AAGTTCATTCGGGCCTGTGGTCTATGCTCTTGTGGACAATAAAGAAGAAGGCAGAAGGCTTCAAACAGAAGTCCAGAAAA
TGCTTGACGAAACCGTAGGCGGAGTCACGATGATGACCAGGGCTAAAAACAGCGGAGCAGAGATAACCAGAACCTGA

Upstream 100 bases:

>100_bases
GCAGGATTTTTTTTAAAAGATTAAATATGAGCAATTACAATAGAAAGTAAAGATAATGAGGATATTATAAAATTTTAAAA
TGTCCGGGATTGACAAACAC

Downstream 100 bases:

>100_bases
ATATGAAAAATCTGAAGCCCTGGTAAAAGAGTTAGGATGGATTAATTACCGGGAGAAATTACCGGGAGATACGGATTCAG
GAGAATTAACATGGGCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRMEKAAKTLLPEGKGIRVNVEEV
YPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKRGGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPP
GPVLFREDFPEWDILLAIPNEKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN
KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVGGVTMMTRAKNSGAEITRT

Sequences:

>Translated_318_residues
MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRMEKAAKTLLPEGKGIRVNVEEV
YPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKRGGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPP
GPVLFREDFPEWDILLAIPNEKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN
KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVGGVTMMTRAKNSGAEITRT
>Mature_318_residues
MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRMEKAAKTLLPEGKGIRVNVEEV
YPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKRGGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPP
GPVLFREDFPEWDILLAIPNEKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN
KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVGGVTMMTRAKNSGAEITRT

Specific function: Unknown

COG id: COG1907

COG function: function code R; Predicted archaeal sugar kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004422
- InterPro:   IPR006204
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF00288 GHMP_kinases_N [H]

EC number: NA

Molecular weight: Translated: 34475; Mature: 34475

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRME
CEEECCCCEEEEEEEECCCCEEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHH
KAAKTLLPEGKGIRVNVEEVYPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKR
HHHHHHCCCCCCEEEEHHHHCEEHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPPGPVLFREDFPEWDILLAIPN
CCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCC
EKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVG
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC
GVTMMTRAKNSGAEITRT
CEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRME
CEEECCCCEEEEEEEECCCCEEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHH
KAAKTLLPEGKGIRVNVEEVYPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKR
HHHHHHCCCCCCEEEEHHHHCEEHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPPGPVLFREDFPEWDILLAIPN
CCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCC
EKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVG
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC
GVTMMTRAKNSGAEITRT
CEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]