| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227007
Identifier: 21227007
GI number: 21227007
Start: 1070316
End: 1071272
Strand: Direct
Name: 21227007
Synonym: MM_0905
Alternate gene names: NA
Gene position: 1070316-1071272 (Clockwise)
Preceding gene: 21227006
Following gene: 21227011
Centisome position: 26.13
GC content: 46.5
Gene sequence:
>957_bases ATGATCAGAATAACCACCCCTTGCAGAATTCATATGACTCTTATTGATATGAATGGAGAAATCGGAAGAGTCGATGGAGG AGCAGGACTTACCCTTTCATCTCCGAATATAGAGATTACGGCAGAAGAAGCCGAGGAAGTCAGTATTGAAGGTCTTCAGG ATTTTGCCGATCGAATGGAAAAAGCTGCAAAAACCCTGCTCCCTGAAGGGAAAGGAATCAGGGTCAATGTTGAGGAAGTG TACCCGGCTCATGTGGGTTTTGGATCAGGAACTCAATCTTCCCTGGCAGTAGCGGCAGCAGTGAATGAACTCTACGGGCT TGGGAAGAGTGTCAGAGAACTCGCACTCACAGTAAAAAGAGGAGGAACTTCAGGTATAGGAGTAACTGCTTTTGAGAAAG GAGGGTTTATAGTTGACGGAGGACACAAATTTAAAGATAAGGGAGGATTTATGCCATCGGCTGCAAGCCGCGTACCTCCC GGTCCAGTTCTCTTCCGGGAGGATTTCCCTGAATGGGATATCCTGTTAGCAATTCCAAATGAGAAAGGAATGCATGACCA GGAGGAAATTGATACATTCAAAAAATTCTGCCCCCTGCCCATAGAGGAAGTAAGGGAAATTTCCCATGTAGTGCTCATGC AGATGATGCCTGCCGTAATAGAGGGAGATATTGAGAGTTTCGGAGCTGCAATAAATCATGTCCAGACTGTCGGCTTTAAC AAGAGGGAGAGCCTTATCTGGCCGGATTTTGTAAAGAATATTGCTTCTTTCCTGCGCAGCCAGTGTTATGGAGCCGGAGT AAGTTCATTCGGGCCTGTGGTCTATGCTCTTGTGGACAATAAAGAAGAAGGCAGAAGGCTTCAAACAGAAGTCCAGAAAA TGCTTGACGAAACCGTAGGCGGAGTCACGATGATGACCAGGGCTAAAAACAGCGGAGCAGAGATAACCAGAACCTGA
Upstream 100 bases:
>100_bases GCAGGATTTTTTTTAAAAGATTAAATATGAGCAATTACAATAGAAAGTAAAGATAATGAGGATATTATAAAATTTTAAAA TGTCCGGGATTGACAAACAC
Downstream 100 bases:
>100_bases ATATGAAAAATCTGAAGCCCTGGTAAAAGAGTTAGGATGGATTAATTACCGGGAGAAATTACCGGGAGATACGGATTCAG GAGAATTAACATGGGCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRMEKAAKTLLPEGKGIRVNVEEV YPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKRGGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPP GPVLFREDFPEWDILLAIPNEKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVGGVTMMTRAKNSGAEITRT
Sequences:
>Translated_318_residues MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRMEKAAKTLLPEGKGIRVNVEEV YPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKRGGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPP GPVLFREDFPEWDILLAIPNEKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVGGVTMMTRAKNSGAEITRT >Mature_318_residues MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRMEKAAKTLLPEGKGIRVNVEEV YPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKRGGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPP GPVLFREDFPEWDILLAIPNEKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVGGVTMMTRAKNSGAEITRT
Specific function: Unknown
COG id: COG1907
COG function: function code R; Predicted archaeal sugar kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004422 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 34475; Mature: 34475
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRME CEEECCCCEEEEEEEECCCCEEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHH KAAKTLLPEGKGIRVNVEEVYPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKR HHHHHHCCCCCCEEEEHHHHCEEHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC GGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPPGPVLFREDFPEWDILLAIPN CCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCC EKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC GVTMMTRAKNSGAEITRT CEEEEEECCCCCCCCCCC >Mature Secondary Structure MIRITTPCRIHMTLIDMNGEIGRVDGGAGLTLSSPNIEITAEEAEEVSIEGLQDFADRME CEEECCCCEEEEEEEECCCCEEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHH KAAKTLLPEGKGIRVNVEEVYPAHVGFGSGTQSSLAVAAAVNELYGLGKSVRELALTVKR HHHHHHCCCCCCEEEEHHHHCEEHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC GGTSGIGVTAFEKGGFIVDGGHKFKDKGGFMPSAASRVPPGPVLFREDFPEWDILLAIPN CCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCC EKGMHDQEEIDTFKKFCPLPIEEVREISHVVLMQMMPAVIEGDIESFGAAINHVQTVGFN CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC KRESLIWPDFVKNIASFLRSQCYGAGVSSFGPVVYALVDNKEEGRRLQTEVQKMLDETVG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC GVTMMTRAKNSGAEITRT CEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]