Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227011

Identifier: 21227011

GI number: 21227011

Start: 1075602

End: 1076495

Strand: Direct

Name: 21227011

Synonym: MM_0909

Alternate gene names: NA

Gene position: 1075602-1076495 (Clockwise)

Preceding gene: 21227007

Following gene: 21227012

Centisome position: 26.26

GC content: 42.73

Gene sequence:

>894_bases
TTGAGTTCCAGCGAAAATTCACTCAAAGATTATTTACCAATCCTCTCCATGGCAGGACTAATATTAATAGTACAGATTCT
TTCCCTGCTCCTGTCCACGCCAATGGAAACGAATGAAATGCAGGCTTTTGAAGATCCCACGCAGGTTTCCAACTCAATAT
ATTATATCGTAATGATCCTGACTTTTACGCTTTTTGTTCTGATAGCTATAAAGAAAAACATGAAATGGGTCATCAGCTTA
CTGATATATCTCGCTATATTAAGCACTCTATACTATGTATTTTTCGCACTTTTAACCCTGATTCCTTCACTCGCAGGCCT
TGAAAATATAATTTCAATCCTGCTGTCTACCGGATTAACATTACTGCTCTACAAATACCCGGAATGGTATGTAATCGATA
TCCTGGGAGTCTGCATAGCAGCTGGAGTCAGTGCCCTGATAGGGATTTCCCTTTCCGTTATCCCGGTAGTAGTCCTTCTG
ATACTTCTTGCGGTCTATGATGCTATCTCGGTGTACAAAACAAAACACATGATAACTATGGCTGAGGGTGTGATGGACCT
TAAACTCCCCATTCTATTCATAATTCCAAAACATCGGGACTATTCATTTATTAAAGAGAGTTTTAAAGAAGGAGAAACTC
GTGAAGCTTTTTTCATGGGGCTTGGTGACGCGGTCATGCCCAGTTTGCTTGTAGTTTCCGCAAATGTATTCATTGAAAAC
GGAGGCATCTCATATCCGGTACTCGGGGCAATGCTGGGGACTCTTGCAGGGCATGTGATCCTGTCTATCCTGGTGATGAG
AGGAAAACCCCAGGCAGGGCTCCCCTTCCTGAATTCCGGAGCAATTCTGGGCTTTTTTGCAGGGGTTTTGCTTTCGGGAG
CATCAATTCTGTGA

Upstream 100 bases:

>100_bases
ACAGTATATAATAGAGAGGATAAAAATTGAAGATAGAGGATAGAGTAAATATATAAAGGAATAGAAAAAGCATACTGTCA
AGAAATAAGGAGTTTAATAA

Downstream 100 bases:

>100_bases
AGAAAGAAAAAGGAAGGTTTAACTTTACTACTTCATTTATTTTTATAAAATTCCTTTTTCCGCCTGTTTTTTTCTGTTTT
CACAAAGATTTTTTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSSSENSLKDYLPILSMAGLILIVQILSLLLSTPMETNEMQAFEDPTQVSNSIYYIVMILTFTLFVLIAIKKNMKWVISL
LIYLAILSTLYYVFFALLTLIPSLAGLENIISILLSTGLTLLLYKYPEWYVIDILGVCIAAGVSALIGISLSVIPVVVLL
ILLAVYDAISVYKTKHMITMAEGVMDLKLPILFIIPKHRDYSFIKESFKEGETREAFFMGLGDAVMPSLLVVSANVFIEN
GGISYPVLGAMLGTLAGHVILSILVMRGKPQAGLPFLNSGAILGFFAGVLLSGASIL

Sequences:

>Translated_297_residues
MSSSENSLKDYLPILSMAGLILIVQILSLLLSTPMETNEMQAFEDPTQVSNSIYYIVMILTFTLFVLIAIKKNMKWVISL
LIYLAILSTLYYVFFALLTLIPSLAGLENIISILLSTGLTLLLYKYPEWYVIDILGVCIAAGVSALIGISLSVIPVVVLL
ILLAVYDAISVYKTKHMITMAEGVMDLKLPILFIIPKHRDYSFIKESFKEGETREAFFMGLGDAVMPSLLVVSANVFIEN
GGISYPVLGAMLGTLAGHVILSILVMRGKPQAGLPFLNSGAILGFFAGVLLSGASIL
>Mature_296_residues
SSSENSLKDYLPILSMAGLILIVQILSLLLSTPMETNEMQAFEDPTQVSNSIYYIVMILTFTLFVLIAIKKNMKWVISLL
IYLAILSTLYYVFFALLTLIPSLAGLENIISILLSTGLTLLLYKYPEWYVIDILGVCIAAGVSALIGISLSVIPVVVLLI
LLAVYDAISVYKTKHMITMAEGVMDLKLPILFIIPKHRDYSFIKESFKEGETREAFFMGLGDAVMPSLLVVSANVFIENG
GISYPVLGAMLGTLAGHVILSILVMRGKPQAGLPFLNSGAILGFFAGVLLSGASIL

Specific function: Unknown

COG id: COG3389

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32326; Mature: 32194

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSENSLKDYLPILSMAGLILIVQILSLLLSTPMETNEMQAFEDPTQVSNSIYYIVMIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHH
TFTLFVLIAIKKNMKWVISLLIYLAILSTLYYVFFALLTLIPSLAGLENIISILLSTGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLLYKYPEWYVIDILGVCIAAGVSALIGISLSVIPVVVLLILLAVYDAISVYKTKHMITM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGVMDLKLPILFIIPKHRDYSFIKESFKEGETREAFFMGLGDAVMPSLLVVSANVFIEN
HHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHEEEC
GGISYPVLGAMLGTLAGHVILSILVMRGKPQAGLPFLNSGAILGFFAGVLLSGASIL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSSENSLKDYLPILSMAGLILIVQILSLLLSTPMETNEMQAFEDPTQVSNSIYYIVMIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHH
TFTLFVLIAIKKNMKWVISLLIYLAILSTLYYVFFALLTLIPSLAGLENIISILLSTGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLLYKYPEWYVIDILGVCIAAGVSALIGISLSVIPVVVLLILLAVYDAISVYKTKHMITM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGVMDLKLPILFIIPKHRDYSFIKESFKEGETREAFFMGLGDAVMPSLLVVSANVFIEN
HHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHEEEC
GGISYPVLGAMLGTLAGHVILSILVMRGKPQAGLPFLNSGAILGFFAGVLLSGASIL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA