Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226983

Identifier: 21226983

GI number: 21226983

Start: 1039984

End: 1041288

Strand: Reverse

Name: 21226983

Synonym: MM_0881

Alternate gene names: NA

Gene position: 1041288-1039984 (Counterclockwise)

Preceding gene: 21226986

Following gene: 21226974

Centisome position: 25.42

GC content: 32.49

Gene sequence:

>1305_bases
ATGGTAACTATAAACCTTACTCTTAATAACTTTTCGGAGCTCCCTGCTCTTTTAGACGTTTTTGGTTGTTTTGGAAACGA
TTACGAATACACTACACAAGGAATTTTTCGTAGAAAAATTCCTCCAGCCTGTTCTATTTGTAGTACTCCAATGGTTCATA
ATGGCTATAATCCCCATACCAAACAAGGTCTTGGAGAAATCATCATTGGTCGATATAAATGCTCAAATTGTGGTAGTACA
CACGAAGAAGATCATAGCTTTTGGGAAGATCTGAAAGCTTTACTTTATGATTCATTCAATGATTTCTTCAAGTTACTCAG
ATACCATAACGTTTCATATGAAGGAATCTCTGATATAATGGACTTCATCTATCCAAGATCAAGAAGCACTATTTTAAGAG
CATTCTACAAAGAAATGGAACAGGAAACTGTTCCATTTTCAGAAAATATACATATGGTACACTATGACGAACAACATCCA
AAAGAAGGACGCTGTCAGAAATACCGTTTAACCTTACTGGACGCAAAAACTCAAACAACAATAGCAGATGACCTTTTTGA
TGATAAGAGTCCAGAAACAATCAAGGAATTTCTACGGAAAAATCTTGATGCATCAGAACCTGTGTTTATCGTTACGGATT
TTGATAAGAGATACCCTGATATATTAAAGGAAATTTTTGGAGATAAGTTAGTGCATCAATATTGTTTGATGCACTTAAAC
AAGCTTATAGTTAGTGATTTTCCAAAAAATACAACCATTGAACAGGAACTATTGAAGTACAGGTTATTGAATATATTTTA
CAATCGAGAGAATGAAATTAAATTTTTGGAAGAACTTCAATCTGAAGAACTCAACGTAATTAATAATGAAGAAAAACATC
AAGAATGGAGTAAAAAAGCAAAAAAGGAATTTAACCAGTTTAGACGTAAATTAAAGCTTGAAAGAAGACGAAAAAAGGAA
AATCTTCCACTTAATAGTCTTGAAAAAGCAAAACATAACTTCGATAAATTAATGGAAAATATAAGAACATACGATCAAAC
GATTCAAAAACGATTATGGATGATCAATAAACACTGGTTAAATCTTACTTTGTTCCATTATCTTCCAGGAGCGCCAGCGA
CAAATAACCCTATCGAAAGCTATTATTCTAAAAGTCTAAAAACTGATAACAAGAAGCAGTTCAGGACTGATAAAGGAATT
GGGAACCAGATTAAACTTACTCAAATGAGAAGATTAAATTTGCTCAAGAAACCACAAAAGTCATTTCTGGAATTGTTCAG
ATTATTTAATCCATTTAAGCTTTAG

Upstream 100 bases:

>100_bases
CTCCAGGACTCAGTTCCAAAATCTAGTGATAAAAGTAAATGTAACATCACTACACAAAATTATAATTCTATAATTATGTA
ATGATGTTACGGCACAAATA

Downstream 100 bases:

>100_bases
TAATCTATTTTGGGATAGGAGTTAAGGATTATGTAGCGGAGCGTATCGATTTTAGGCAAAAAATAAAGTGAAAAATTAAA
GGAATAAAAGAATTCTTTGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MVTINLTLNNFSELPALLDVFGCFGNDYEYTTQGIFRRKIPPACSICSTPMVHNGYNPHTKQGLGEIIIGRYKCSNCGST
HEEDHSFWEDLKALLYDSFNDFFKLLRYHNVSYEGISDIMDFIYPRSRSTILRAFYKEMEQETVPFSENIHMVHYDEQHP
KEGRCQKYRLTLLDAKTQTTIADDLFDDKSPETIKEFLRKNLDASEPVFIVTDFDKRYPDILKEIFGDKLVHQYCLMHLN
KLIVSDFPKNTTIEQELLKYRLLNIFYNRENEIKFLEELQSEELNVINNEEKHQEWSKKAKKEFNQFRRKLKLERRRKKE
NLPLNSLEKAKHNFDKLMENIRTYDQTIQKRLWMINKHWLNLTLFHYLPGAPATNNPIESYYSKSLKTDNKKQFRTDKGI
GNQIKLTQMRRLNLLKKPQKSFLELFRLFNPFKL

Sequences:

>Translated_434_residues
MVTINLTLNNFSELPALLDVFGCFGNDYEYTTQGIFRRKIPPACSICSTPMVHNGYNPHTKQGLGEIIIGRYKCSNCGST
HEEDHSFWEDLKALLYDSFNDFFKLLRYHNVSYEGISDIMDFIYPRSRSTILRAFYKEMEQETVPFSENIHMVHYDEQHP
KEGRCQKYRLTLLDAKTQTTIADDLFDDKSPETIKEFLRKNLDASEPVFIVTDFDKRYPDILKEIFGDKLVHQYCLMHLN
KLIVSDFPKNTTIEQELLKYRLLNIFYNRENEIKFLEELQSEELNVINNEEKHQEWSKKAKKEFNQFRRKLKLERRRKKE
NLPLNSLEKAKHNFDKLMENIRTYDQTIQKRLWMINKHWLNLTLFHYLPGAPATNNPIESYYSKSLKTDNKKQFRTDKGI
GNQIKLTQMRRLNLLKKPQKSFLELFRLFNPFKL
>Mature_434_residues
MVTINLTLNNFSELPALLDVFGCFGNDYEYTTQGIFRRKIPPACSICSTPMVHNGYNPHTKQGLGEIIIGRYKCSNCGST
HEEDHSFWEDLKALLYDSFNDFFKLLRYHNVSYEGISDIMDFIYPRSRSTILRAFYKEMEQETVPFSENIHMVHYDEQHP
KEGRCQKYRLTLLDAKTQTTIADDLFDDKSPETIKEFLRKNLDASEPVFIVTDFDKRYPDILKEIFGDKLVHQYCLMHLN
KLIVSDFPKNTTIEQELLKYRLLNIFYNRENEIKFLEELQSEELNVINNEEKHQEWSKKAKKEFNQFRRKLKLERRRKKE
NLPLNSLEKAKHNFDKLMENIRTYDQTIQKRLWMINKHWLNLTLFHYLPGAPATNNPIESYYSKSLKTDNKKQFRTDKGI
GNQIKLTQMRRLNLLKKPQKSFLELFRLFNPFKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51766; Mature: 51766

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTINLTLNNFSELPALLDVFGCFGNDYEYTTQGIFRRKIPPACSICSTPMVHNGYNPHT
CEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHH
KQGLGEIIIGRYKCSNCGSTHEEDHSFWEDLKALLYDSFNDFFKLLRYHNVSYEGISDIM
HHCHHHHHEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DFIYPRSRSTILRAFYKEMEQETVPFSENIHMVHYDEQHPKEGRCQKYRLTLLDAKTQTT
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHEEEEEEECCHHHH
IADDLFDDKSPETIKEFLRKNLDASEPVFIVTDFDKRYPDILKEIFGDKLVHQYCLMHLN
HHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLIVSDFPKNTTIEQELLKYRLLNIFYNRENEIKFLEELQSEELNVINNEEKHQEWSKKA
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KKEFNQFRRKLKLERRRKKENLPLNSLEKAKHNFDKLMENIRTYDQTIQKRLWMINKHWL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLTLFHYLPGAPATNNPIESYYSKSLKTDNKKQFRTDKGIGNQIKLTQMRRLNLLKKPQK
HEEHEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCHHH
SFLELFRLFNPFKL
HHHHHHHHHCCCCC
>Mature Secondary Structure
MVTINLTLNNFSELPALLDVFGCFGNDYEYTTQGIFRRKIPPACSICSTPMVHNGYNPHT
CEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHH
KQGLGEIIIGRYKCSNCGSTHEEDHSFWEDLKALLYDSFNDFFKLLRYHNVSYEGISDIM
HHCHHHHHEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DFIYPRSRSTILRAFYKEMEQETVPFSENIHMVHYDEQHPKEGRCQKYRLTLLDAKTQTT
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHEEEEEEECCHHHH
IADDLFDDKSPETIKEFLRKNLDASEPVFIVTDFDKRYPDILKEIFGDKLVHQYCLMHLN
HHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLIVSDFPKNTTIEQELLKYRLLNIFYNRENEIKFLEELQSEELNVINNEEKHQEWSKKA
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KKEFNQFRRKLKLERRRKKENLPLNSLEKAKHNFDKLMENIRTYDQTIQKRLWMINKHWL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLTLFHYLPGAPATNNPIESYYSKSLKTDNKKQFRTDKGIGNQIKLTQMRRLNLLKKPQK
HEEHEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCHHH
SFLELFRLFNPFKL
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA