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The map label for this gene is 21226974

Identifier: 21226974

GI number: 21226974

Start: 1030512

End: 1031252

Strand: Reverse

Name: 21226974

Synonym: MM_0872

Alternate gene names: NA

Gene position: 1031252-1030512 (Counterclockwise)

Preceding gene: 21226983

Following gene: 21226973

Centisome position: 25.17

GC content: 47.37

Gene sequence:

>741_bases
ATGACATCCAATGATTCCTCAGAAAATCTGCGCAACCGCCTGGCGGAAAAAATGGCTGGAGATATCACACTCTCAGAGAA
ACCCGGAGAGTCCCTGAAAAAGTGGAGGTTAAACTTCGAGATATCCCAGACTGATATTGCAAATTACCTTAAGGTCTCTC
CCTCCGTTATCAGCGATTATGAAAGCGGGAGGCGAAAGTCTCCAGGGACACTGATCGTCCGGAAGATCGTGGAGTCCCTG
CTTGAAATCGATCTAGAGAGGGGAGGCAAAAAGATTCACACCTACGAAACTATGCTTAATGCCGAAAGCGGCTCAAAATC
AATCTACTCAACCTACGAGTATACTCTCCCGATACAGCTTGCTAAACTGGTTAACCTTATTGAAGGCGATATAGTCTATA
AAGGAATCGAGAAGCCTCTATATGGTTTTTCTGTTGTCGACAGCCAGCGGGCAATCCTGGAACTTTCCTCACACGAGTTT
CAGAAGCTCTACGGCTGGAGTACGGACAGAGCCATGATCTTTACAAAAGTCAGTACCGGAAAATCCCCCCTGGTAGCTAT
CCGGGTAACTAACCTGAAGCCCGGAGCTGTTGTGCTTCACGGACTTCGTAAAGAAGAGGTAGAATCTGTTGCAGTCAAGA
TGGCGGAAGTAGACCGTGTCCCCCTGGTCGCAACCACAATGGACCTCGATCAGATTGTGCAGCTACTGAAAAAATACAGT
CAATACTACGCAAGGGAATGA

Upstream 100 bases:

>100_bases
AAAGAGCTTCTCGTATTCGACAGTTAACGCTCTGCGACAATTGCCGAACTGACATTCGTTAGATATATATGCTAATGTTT
CCTCTTAGATTAAGTAAGTC

Downstream 100 bases:

>100_bases
CCCCCTGGAATACCCTAAACACTTAAAAACAGGTGAAAGCATGACCATTGGAATAGTATCTTACGGCGCATATGTTCCGA
GATACCGCATAAAAATTGAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTSNDSSENLRNRLAEKMAGDITLSEKPGESLKKWRLNFEISQTDIANYLKVSPSVISDYESGRRKSPGTLIVRKIVESL
LEIDLERGGKKIHTYETMLNAESGSKSIYSTYEYTLPIQLAKLVNLIEGDIVYKGIEKPLYGFSVVDSQRAILELSSHEF
QKLYGWSTDRAMIFTKVSTGKSPLVAIRVTNLKPGAVVLHGLRKEEVESVAVKMAEVDRVPLVATTMDLDQIVQLLKKYS
QYYARE

Sequences:

>Translated_246_residues
MTSNDSSENLRNRLAEKMAGDITLSEKPGESLKKWRLNFEISQTDIANYLKVSPSVISDYESGRRKSPGTLIVRKIVESL
LEIDLERGGKKIHTYETMLNAESGSKSIYSTYEYTLPIQLAKLVNLIEGDIVYKGIEKPLYGFSVVDSQRAILELSSHEF
QKLYGWSTDRAMIFTKVSTGKSPLVAIRVTNLKPGAVVLHGLRKEEVESVAVKMAEVDRVPLVATTMDLDQIVQLLKKYS
QYYARE
>Mature_245_residues
TSNDSSENLRNRLAEKMAGDITLSEKPGESLKKWRLNFEISQTDIANYLKVSPSVISDYESGRRKSPGTLIVRKIVESLL
EIDLERGGKKIHTYETMLNAESGSKSIYSTYEYTLPIQLAKLVNLIEGDIVYKGIEKPLYGFSVVDSQRAILELSSHEFQ
KLYGWSTDRAMIFTKVSTGKSPLVAIRVTNLKPGAVVLHGLRKEEVESVAVKMAEVDRVPLVATTMDLDQIVQLLKKYSQ
YYARE

Specific function: Unknown

COG id: COG1709

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR017271
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 27699; Mature: 27568

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNDSSENLRNRLAEKMAGDITLSEKPGESLKKWRLNFEISQTDIANYLKVSPSVISDY
CCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHEEECEEECHHHHHHHHHCCHHHHHHH
ESGRRKSPGTLIVRKIVESLLEIDLERGGKKIHTYETMLNAESGSKSIYSTYEYTLPIQL
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCEEEEEEEEHHHHH
AKLVNLIEGDIVYKGIEKPLYGFSVVDSQRAILELSSHEFQKLYGWSTDRAMIFTKVSTG
HHHHHHHHCHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
KSPLVAIRVTNLKPGAVVLHGLRKEEVESVAVKMAEVDRVPLVATTMDLDQIVQLLKKYS
CCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
QYYARE
HHHCCC
>Mature Secondary Structure 
TSNDSSENLRNRLAEKMAGDITLSEKPGESLKKWRLNFEISQTDIANYLKVSPSVISDY
CCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHEEECEEECHHHHHHHHHCCHHHHHHH
ESGRRKSPGTLIVRKIVESLLEIDLERGGKKIHTYETMLNAESGSKSIYSTYEYTLPIQL
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCEEEEEEEEHHHHH
AKLVNLIEGDIVYKGIEKPLYGFSVVDSQRAILELSSHEFQKLYGWSTDRAMIFTKVSTG
HHHHHHHHCHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
KSPLVAIRVTNLKPGAVVLHGLRKEEVESVAVKMAEVDRVPLVATTMDLDQIVQLLKKYS
CCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
QYYARE
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]