| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226986
Identifier: 21226986
GI number: 21226986
Start: 1044767
End: 1045021
Strand: Reverse
Name: 21226986
Synonym: MM_0884
Alternate gene names: NA
Gene position: 1045021-1044767 (Counterclockwise)
Preceding gene: 21226987
Following gene: 21226983
Centisome position: 25.51
GC content: 45.1
Gene sequence:
>255_bases ATGATTAAAAAACCGTTTACAATCCAGTTCCCGGAAAATCCGGTTAGCGGATTTAGCTGGGACATCGCGACCAGTAACGG GCTGCAGGTAATGAGGGAACGATTTATTCCTGAGGATAAGGAACAGACCAGTGGTGGAGGATACCGGGTATGGGATATTC AGGTAACTTGCCAGGGAAGTCAAAAGATAACAGGCACATATCGGAGGGGTAACCAGATAGCAAGTTGTTTTGAAATCAAT ATTGACGCCGAATAA
Upstream 100 bases:
>100_bases CAAAACGGCACTTCCTTTGAAATTCGCTAAAATTGGCGAAAAAATTTGTAGAGTGGGTAAGGAAGGACGGCTACATAAGG ACGGTTAGGAGAGGGACAAT
Downstream 100 bases:
>100_bases GAATTTTTACAGGCTGAAAAAATGAAGCCCTGGAAAGGTCGCCTTCTCTGGTAAAAGTCCAATCCGCCCTGCTTTTCCAG GATTCACTTTTCTGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MIKKPFTIQFPENPVSGFSWDIATSNGLQVMRERFIPEDKEQTSGGGYRVWDIQVTCQGSQKITGTYRRGNQIASCFEIN IDAE
Sequences:
>Translated_84_residues MIKKPFTIQFPENPVSGFSWDIATSNGLQVMRERFIPEDKEQTSGGGYRVWDIQVTCQGSQKITGTYRRGNQIASCFEIN IDAE >Mature_84_residues MIKKPFTIQFPENPVSGFSWDIATSNGLQVMRERFIPEDKEQTSGGGYRVWDIQVTCQGSQKITGTYRRGNQIASCFEIN IDAE
Specific function: Unknown
COG id: COG5513
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9519; Mature: 9519
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKPFTIQFPENPVSGFSWDIATSNGLQVMRERFIPEDKEQTSGGGYRVWDIQVTCQGS CCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCC QKITGTYRRGNQIASCFEINIDAE CEEEEEECCCCEEEEEEEEEEECC >Mature Secondary Structure MIKKPFTIQFPENPVSGFSWDIATSNGLQVMRERFIPEDKEQTSGGGYRVWDIQVTCQGS CCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCC QKITGTYRRGNQIASCFEINIDAE CEEEEEECCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA