| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226975
Identifier: 21226975
GI number: 21226975
Start: 1031391
End: 1032212
Strand: Direct
Name: 21226975
Synonym: MM_0873
Alternate gene names: NA
Gene position: 1031391-1032212 (Clockwise)
Preceding gene: 161485679
Following gene: 21226976
Centisome position: 25.18
GC content: 45.74
Gene sequence:
>822_bases GTGATGCCCACAGATTCACAGAACCCGGAGATCAGCGTCTCAGACCTGCTCCTGTATATCAATTGCCCGCGAAGGGTTTA CTTTGTCAGCCGGGGATATGAACTGCTCCCGGAAATTAATGCTTCCCGTCTTGAGAGAATGCTTCTGAAGGAACTCTCCC TGAATTATTCGGAAATTGTGAAAAAGTGTTCGTTAAACGCCGATACCATGTGCAAAGAACTCGAAGCTGCTCTCACTTAT GCATGTAAAGACCTCCCGTTAATGTTTCCAAAAGAATTTGAACGCACAGAAAAAGGATTTCTGGAAGAAGGGGACGCGCG GGCAAGAGCTAAAATCCCTGAAATTGCAGCCAACCTTCTCAAAGGGATAGAAGAATTCGGAAATGATGCCATGCTTGCGG CACTTACCCCTGTAAAAACGGAGCCCATTATTTTCTCAAAGCGCCTGAACCTGAAGGGATCACCTTCCAAGATAGTCTGT TTTGAAGGCGCAAATGTCCCCTCAATAATAAGGCCCGGAAGCTGCCCCATTCAGGGCGTATGGGCATCTGACAGAATACA CATTGCAGCACTTGCCCTTCTCCTTGAAAGCGAGACCGGAAAAGAAATTCCTTTCGGTTTTGTCGAATACGTAAGTTTCG GGATAATCCGAAAAGTAGTTATCCGGAGTTCGGACCGCAGGGAAGTATTGAAAATATGCAGGCGTGTGGAAAAAATAAAA GCCGGATTGATGCCCGAAAAAACAGAAGAAAAATTCTGTCCGGAATGCACCTTTTCAGAGCACTGTGTTTCGAATTCTTC CCTCATGTCCAAGTTTTTCTAA
Upstream 100 bases:
>100_bases CTAACGAATGTCAGTTCGGCAATTGTCGCAGAGCGTTAACTGTCGAATACGAGAAGCTCTTTATGAAAAAATTTATAATA TTTAGAAGAGAAATTACAAT
Downstream 100 bases:
>100_bases ATCATGAATGGATGGAAAAGGATTGCAGCATAATAAAAAAAGCAAAAACAAAACTGTTGTTCAGTAACAGTTGTAAGGAC TTTTTTGAGTGCGACTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MMPTDSQNPEISVSDLLLYINCPRRVYFVSRGYELLPEINASRLERMLLKELSLNYSEIVKKCSLNADTMCKELEAALTY ACKDLPLMFPKEFERTEKGFLEEGDARARAKIPEIAANLLKGIEEFGNDAMLAALTPVKTEPIIFSKRLNLKGSPSKIVC FEGANVPSIIRPGSCPIQGVWASDRIHIAALALLLESETGKEIPFGFVEYVSFGIIRKVVIRSSDRREVLKICRRVEKIK AGLMPEKTEEKFCPECTFSEHCVSNSSLMSKFF
Sequences:
>Translated_273_residues MMPTDSQNPEISVSDLLLYINCPRRVYFVSRGYELLPEINASRLERMLLKELSLNYSEIVKKCSLNADTMCKELEAALTY ACKDLPLMFPKEFERTEKGFLEEGDARARAKIPEIAANLLKGIEEFGNDAMLAALTPVKTEPIIFSKRLNLKGSPSKIVC FEGANVPSIIRPGSCPIQGVWASDRIHIAALALLLESETGKEIPFGFVEYVSFGIIRKVVIRSSDRREVLKICRRVEKIK AGLMPEKTEEKFCPECTFSEHCVSNSSLMSKFF >Mature_273_residues MMPTDSQNPEISVSDLLLYINCPRRVYFVSRGYELLPEINASRLERMLLKELSLNYSEIVKKCSLNADTMCKELEAALTY ACKDLPLMFPKEFERTEKGFLEEGDARARAKIPEIAANLLKGIEEFGNDAMLAALTPVKTEPIIFSKRLNLKGSPSKIVC FEGANVPSIIRPGSCPIQGVWASDRIHIAALALLLESETGKEIPFGFVEYVSFGIIRKVVIRSSDRREVLKICRRVEKIK AGLMPEKTEEKFCPECTFSEHCVSNSSLMSKFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30712; Mature: 30712
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPTDSQNPEISVSDLLLYINCPRRVYFVSRGYELLPEINASRLERMLLKELSLNYSEIV CCCCCCCCCCEEHHHEEEEEECCCEEEEECCCCHHHCCCCHHHHHHHHHHHHCCCHHHHH KKCSLNADTMCKELEAALTYACKDLPLMFPKEFERTEKGFLEEGDARARAKIPEIAANLL HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KGIEEFGNDAMLAALTPVKTEPIIFSKRLNLKGSPSKIVCFEGANVPSIIRPGSCPIQGV HHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEE WASDRIHIAALALLLESETGKEIPFGFVEYVSFGIIRKVVIRSSDRREVLKICRRVEKIK CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AGLMPEKTEEKFCPECTFSEHCVSNSSLMSKFF HCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHCC >Mature Secondary Structure MMPTDSQNPEISVSDLLLYINCPRRVYFVSRGYELLPEINASRLERMLLKELSLNYSEIV CCCCCCCCCCEEHHHEEEEEECCCEEEEECCCCHHHCCCCHHHHHHHHHHHHCCCHHHHH KKCSLNADTMCKELEAALTYACKDLPLMFPKEFERTEKGFLEEGDARARAKIPEIAANLL HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KGIEEFGNDAMLAALTPVKTEPIIFSKRLNLKGSPSKIVCFEGANVPSIIRPGSCPIQGV HHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEE WASDRIHIAALALLLESETGKEIPFGFVEYVSFGIIRKVVIRSSDRREVLKICRRVEKIK CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AGLMPEKTEEKFCPECTFSEHCVSNSSLMSKFF HCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA