Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226976

Identifier: 21226976

GI number: 21226976

Start: 1032667

End: 1033419

Strand: Direct

Name: 21226976

Synonym: MM_0874

Alternate gene names: NA

Gene position: 1032667-1033419 (Clockwise)

Preceding gene: 21226975

Following gene: 21226977

Centisome position: 25.21

GC content: 33.07

Gene sequence:

>753_bases
ATGTTCAATAAAAGGTTTGGAATAGGAATATTAATTTTGGTAATACTACTGGTTGGTATGACATTGATACCAGCTGTGAG
TGCACAAGAAATCTCAAAGATCAGTAAGAAGCCTTCTGAATTGGAACAAGGGCTAATAGATTCACTGAATTCCAATAAAA
AAAACTTATCCACAGAAGATGTGGTTGCGAATTATGTTAAAGCAAACAAAGATAAAATTTCAATAAATGATCTTAAAGAA
AATGATACTGCTTCAGATAAAATTAATTTAAGGACTTATCAACTAAGAGATGGATCAAATATAACCTTCACAAATGGAAG
CTATTTCTTCATTACTGGCGTAGAGGAAGAAACAAATAATGAAATAACAACTCAAACTGCTACTATAGCGAGTGTTTCGA
CTACTCCCACCATTAAAGGATATAAGGAACTCTATTCTTGGACTGGTGTTAAAGTCTACACAATTTATACAAAGGGGTAT
TTTACTTATAATGGTCAGACTGTAGATGCTCATTATATAGATTCATGGTACGTAAGAAATTATGCATTATATTGGTCAGT
TAGTAACTGGGAAGAAGGAAGTATCGAATATAGTTCAGGTACTCGCTCAGACATCTACGGTAGAGGAACTTTCCAGTGGG
GAATATTTATTGAAGGTACTGGTATAGTTATACGTGAGTTTTATGACAACCTTTACATAAAATGTGATCAAAACGGTAAT
TATCGGGTTATTTTTGAAGAAACTGCTCCTTAA

Upstream 100 bases:

>100_bases
ATAAAACATACCCTACGAGGCATAATTAAGTTAGCTTAGCGTATATTTAAGCTTGTCTTATTCTGCCTCCTAGGGAAAAA
ATAACTAGGAGTGTAATATA

Downstream 100 bases:

>100_bases
CTATAATGATTGTGAAAAAATAATTTATCAAAGGTAGAAATTTGGTTGCGTTACTATAGAAAGGCAAGGTTAACTCTACA
ATTCTTTCATAAAACCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MFNKRFGIGILILVILLVGMTLIPAVSAQEISKISKKPSELEQGLIDSLNSNKKNLSTEDVVANYVKANKDKISINDLKE
NDTASDKINLRTYQLRDGSNITFTNGSYFFITGVEEETNNEITTQTATIASVSTTPTIKGYKELYSWTGVKVYTIYTKGY
FTYNGQTVDAHYIDSWYVRNYALYWSVSNWEEGSIEYSSGTRSDIYGRGTFQWGIFIEGTGIVIREFYDNLYIKCDQNGN
YRVIFEETAP

Sequences:

>Translated_250_residues
MFNKRFGIGILILVILLVGMTLIPAVSAQEISKISKKPSELEQGLIDSLNSNKKNLSTEDVVANYVKANKDKISINDLKE
NDTASDKINLRTYQLRDGSNITFTNGSYFFITGVEEETNNEITTQTATIASVSTTPTIKGYKELYSWTGVKVYTIYTKGY
FTYNGQTVDAHYIDSWYVRNYALYWSVSNWEEGSIEYSSGTRSDIYGRGTFQWGIFIEGTGIVIREFYDNLYIKCDQNGN
YRVIFEETAP
>Mature_250_residues
MFNKRFGIGILILVILLVGMTLIPAVSAQEISKISKKPSELEQGLIDSLNSNKKNLSTEDVVANYVKANKDKISINDLKE
NDTASDKINLRTYQLRDGSNITFTNGSYFFITGVEEETNNEITTQTATIASVSTTPTIKGYKELYSWTGVKVYTIYTKGY
FTYNGQTVDAHYIDSWYVRNYALYWSVSNWEEGSIEYSSGTRSDIYGRGTFQWGIFIEGTGIVIREFYDNLYIKCDQNGN
YRVIFEETAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28367; Mature: 28367

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKRFGIGILILVILLVGMTLIPAVSAQEISKISKKPSELEQGLIDSLNSNKKNLSTED
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH
VVANYVKANKDKISINDLKENDTASDKINLRTYQLRDGSNITFTNGSYFFITGVEEETNN
HHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEECCCEEEEECCCCCCCC
EITTQTATIASVSTTPTIKGYKELYSWTGVKVYTIYTKGYFTYNGQTVDAHYIDSWYVRN
EEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEECCEEEEEEECCCEEEEE
YALYWSVSNWEEGSIEYSSGTRSDIYGRGTFQWGIFIEGTGIVIREFYDNLYIKCDQNGN
EEEEEEECCCCCCCEEECCCCCCCEEECCEEEEEEEEECCCEEEEEECCCEEEEECCCCC
YRVIFEETAP
EEEEEECCCC
>Mature Secondary Structure
MFNKRFGIGILILVILLVGMTLIPAVSAQEISKISKKPSELEQGLIDSLNSNKKNLSTED
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH
VVANYVKANKDKISINDLKENDTASDKINLRTYQLRDGSNITFTNGSYFFITGVEEETNN
HHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEECCCEEEEECCCCCCCC
EITTQTATIASVSTTPTIKGYKELYSWTGVKVYTIYTKGYFTYNGQTVDAHYIDSWYVRN
EEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEECCEEEEEEECCCEEEEE
YALYWSVSNWEEGSIEYSSGTRSDIYGRGTFQWGIFIEGTGIVIREFYDNLYIKCDQNGN
EEEEEEECCCCCCCEEECCCCCCCEEECCEEEEEEEEECCCEEEEEECCCEEEEECCCCC
YRVIFEETAP
EEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA