| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226935
Identifier: 21226935
GI number: 21226935
Start: 983548
End: 984144
Strand: Direct
Name: 21226935
Synonym: MM_0833
Alternate gene names: NA
Gene position: 983548-984144 (Clockwise)
Preceding gene: 21226934
Following gene: 21226936
Centisome position: 24.01
GC content: 42.21
Gene sequence:
>597_bases ATGCAGAAAAAAACCTCCGGGAAAAAAGATGATAATGCAGAAACGGAGAAAAACTCCAGAAAAGAAGAAGAATTTTCTGA ATCTATGAAAGAGCCCTCTCAGAAGGATAATCCCAGGGAAGCAGAGGCGTTTTTTGAATCAATTGTCAGGGGATCCGAAG GCTGCCTCTGGATGACTATTGAAGAGCTTATGACCCGGGACCTTGTAACGGTAAATGAAGATGCACCTGTTGAAGAAGTT TTTTCACTTTTTGCAAAAAATCCCTACCATACCCTGCCCGTAGTTAACAAAAAAGGAGAGCTCGCAGGGGTTATTGACCT TGACATTGTTCTTGAGATCCTGCTTTTATGCCTGATGCCCAGAGCTAAATATACGCCCCTTGCAGCCAGAAGGTCGCTCG GAGAAAACGCAAAAGAAATTATGATTACGCACCCTGTGACAATCTCATTAAATTCCACGTTGAAAGATGTTTCTGACCTT ATGATGAAAAACAGGTTTGACCGCGTTTATGTGAGCGAGAATGGAAAACTCGTGGGGATCATATCAAAAAGAGACCTTGT GAAAGAGATATGCAGACAGAGAAAAATGGATGCATGA
Upstream 100 bases:
>100_bases ATAAATCCAGAAACAAATAGTAGTGGATACTATAGATTGGAAAACAGTAAGGAAGGTATAAAAATAGCCGTGGAGGGGTA TCATTCTGGCAGAGAGCTTT
Downstream 100 bases:
>100_bases AAAAGAATTCTTAAGAAAAAGATGGGCAATAAAGCAAAATTAAAAAAGGAGGCTAAAAAGGAAATTTGAAAAGGAGCTGT AAAAAGGAATTTAAAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain-Containing Membrane Protein; CBS Domain-Containing Protein; Signal Transduction Protein; Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MQKKTSGKKDDNAETEKNSRKEEEFSESMKEPSQKDNPREAEAFFESIVRGSEGCLWMTIEELMTRDLVTVNEDAPVEEV FSLFAKNPYHTLPVVNKKGELAGVIDLDIVLEILLLCLMPRAKYTPLAARRSLGENAKEIMITHPVTISLNSTLKDVSDL MMKNRFDRVYVSENGKLVGIISKRDLVKEICRQRKMDA
Sequences:
>Translated_198_residues MQKKTSGKKDDNAETEKNSRKEEEFSESMKEPSQKDNPREAEAFFESIVRGSEGCLWMTIEELMTRDLVTVNEDAPVEEV FSLFAKNPYHTLPVVNKKGELAGVIDLDIVLEILLLCLMPRAKYTPLAARRSLGENAKEIMITHPVTISLNSTLKDVSDL MMKNRFDRVYVSENGKLVGIISKRDLVKEICRQRKMDA >Mature_198_residues MQKKTSGKKDDNAETEKNSRKEEEFSESMKEPSQKDNPREAEAFFESIVRGSEGCLWMTIEELMTRDLVTVNEDAPVEEV FSLFAKNPYHTLPVVNKKGELAGVIDLDIVLEILLLCLMPRAKYTPLAARRSLGENAKEIMITHPVTISLNSTLKDVSDL MMKNRFDRVYVSENGKLVGIISKRDLVKEICRQRKMDA
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22525; Mature: 22525
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKTSGKKDDNAETEKNSRKEEEFSESMKEPSQKDNPREAEAFFESIVRGSEGCLWMTI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEH EELMTRDLVTVNEDAPVEEVFSLFAKNPYHTLPVVNKKGELAGVIDLDIVLEILLLCLMP HHHHHHHCEECCCCCCHHHHHHHHHCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHCC RAKYTPLAARRSLGENAKEIMITHPVTISLNSTLKDVSDLMMKNRFDRVYVSENGKLVGI CCCCCHHHHHHHHCCCCCEEEEECCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCEEEE ISKRDLVKEICRQRKMDA ECHHHHHHHHHHHHCCCC >Mature Secondary Structure MQKKTSGKKDDNAETEKNSRKEEEFSESMKEPSQKDNPREAEAFFESIVRGSEGCLWMTI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEH EELMTRDLVTVNEDAPVEEVFSLFAKNPYHTLPVVNKKGELAGVIDLDIVLEILLLCLMP HHHHHHHCEECCCCCCHHHHHHHHHCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHCC RAKYTPLAARRSLGENAKEIMITHPVTISLNSTLKDVSDLMMKNRFDRVYVSENGKLVGI CCCCCHHHHHHHHCCCCCEEEEECCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCEEEE ISKRDLVKEICRQRKMDA ECHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA