| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226934
Identifier: 21226934
GI number: 21226934
Start: 981722
End: 983308
Strand: Direct
Name: 21226934
Synonym: MM_0832
Alternate gene names: NA
Gene position: 981722-983308 (Clockwise)
Preceding gene: 21226928
Following gene: 21226935
Centisome position: 23.97
GC content: 42.66
Gene sequence:
>1587_bases ATGCAGAAAATTCCAGGTTATGAAAACACAAATTCGGAGGTTCCGGATAAAAAATACTGGCTTTACGGGCTTATGATTGT GTTTTTTGCCCTTGCCTTCAGATTATTCGAGCTGGGAGAGAGGGTTCTCCACCACGATGAAAGCATACATGCCAGTTTTA CCCTCAAACTTCTTGAACACGGGGAATACAGTTACGATCCAGCCTACCACGGCCCTTTCCTATTCCATTCTACTGCAGCT GTTTTTCATTTTCTCGGAATAACTGACACGACATCCCGTCTTGTCCCGGTCCTGTTCGGAGTTGCAACAATCCTTTTACT TTTTTTGCTGAAAAAAGAACTGGGAAAGAACGGTGTTCTCTGGTCGATGTTTCTGCTTGCTTTTTCTCCGAGTATGGTGT ATTTTTCCAGGTTCTTCAGAAATGATATGATAATTATATTCTGCACCCTGGCCGCAGTGACAGGCGCATTCCGATATCTT GACAGCATACACAGCTTAAAGCGGTACCCTTACCTCGTCCTGGCGGCTTCGTCTCTTGCCGTTGCAGTGTCATCAAAAGA GAATGCTTACATAATTCTTGCTGTCTTCGGGGCTTATGCCGGATTGGGCTTTCTTTACTGGATTTGTTCAGACTGGAAAA AAGAGAATATGGGATTAAAGGAAACCCTTCGCAGTAAGACTTCGGCTCTTTTGCCCTACCTTCCTGAGATCATCCTTTCA GGGGCACTCTCTGTTTTTATTATAATGTTTTTTTACTCCAGTGCTTTCAGGTACGATGTATCTCTTTTTTCAATAGTGGA AAGGGCCTTTAATCACTGGATGGAAATGCACAGTATAGAGAGGATTGGAGGTCCCTTTTACTATTATATCCCTATTCTCC TCAGATATGAGATTCCGGTTGTACTCTTTGGGGCTGCTGGCTTTTTTTATTTCCTGTTTAATAGAGTAAGAAATAAAGGG CAGAATTATTCATTTTTCCTTTTCCTCTGCTACTGGGCGCTTACAAGCTTGCTGCTATATTCATATATTCAGGAAAAAGT CCCCTGGCTTGTCGTTCACATAGTTTTGCCTTTCGGACTTCTGGCGGGAGCCTTTCTTGGAGAAGTATTTTCTAAAAAGA ATAAAGACGGACAGCCGAAAAAGCCTGATTACCCCGGTAAAATCCGTGCTCTACTTACAGTAATTCTTGTGCTTACTCTG CTTGTCTTCATTAGCCAGTGCATCTCGGTAAATTATTATAGAAGTATGGAAGACGAGGAACTGATAACATACACGCAGGC ATCTCCTGATATCAGGATACTGATGGAGAAGATAGAGGGATTCAATGAAAGCCCTGATACCCTTAGAATTTACGTGATTG ACCAGTATCAACTCTACTGGCCCCTTCCCTGGTACCTGCGGGACTATGAAAGAGCGGCATACTCTTCAAAACCACCGTCG AGCAGCAAATACGATGCTATAATCGTCCCCATATCCTGTGATATGTACAGGGAACTTTCAGAAGAAGAATATTCTTCCTA CAATTTCACCCTGCGCCCTGGAAGGGATTTCACTCTTTATTATAACAACAAACTTGAACAGCAATAA
Upstream 100 bases:
>100_bases TTAACTTTTACTTCAGCCATGAGGAAGACTATTTCATCCTACTCCTTAAATATACCTATGCCTTATAAGAAGCATCCATT ACCGGAAGGTTCGGGAAACA
Downstream 100 bases:
>100_bases ACTTGAACAGAAACAAACCTGAAAAACAACAAACCCGAACAGCAACAAATTTGAAAAGTACCAATATTGAAAAGCAACAA ACCTGAAAAAATCAGATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NHL Repeat-Containing Protein; Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Proteinmannosyltransfe Rase; PurK Operon Protein / Membrane-Bound Mannosyltransferase; Membrane-Bound Mannosyltransferase; Membrane-Bound Mannosyltransferase-Like Protein
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MQKIPGYENTNSEVPDKKYWLYGLMIVFFALAFRLFELGERVLHHDESIHASFTLKLLEHGEYSYDPAYHGPFLFHSTAA VFHFLGITDTTSRLVPVLFGVATILLLFLLKKELGKNGVLWSMFLLAFSPSMVYFSRFFRNDMIIIFCTLAAVTGAFRYL DSIHSLKRYPYLVLAASSLAVAVSSKENAYIILAVFGAYAGLGFLYWICSDWKKENMGLKETLRSKTSALLPYLPEIILS GALSVFIIMFFYSSAFRYDVSLFSIVERAFNHWMEMHSIERIGGPFYYYIPILLRYEIPVVLFGAAGFFYFLFNRVRNKG QNYSFFLFLCYWALTSLLLYSYIQEKVPWLVVHIVLPFGLLAGAFLGEVFSKKNKDGQPKKPDYPGKIRALLTVILVLTL LVFISQCISVNYYRSMEDEELITYTQASPDIRILMEKIEGFNESPDTLRIYVIDQYQLYWPLPWYLRDYERAAYSSKPPS SSKYDAIIVPISCDMYRELSEEEYSSYNFTLRPGRDFTLYYNNKLEQQ
Sequences:
>Translated_528_residues MQKIPGYENTNSEVPDKKYWLYGLMIVFFALAFRLFELGERVLHHDESIHASFTLKLLEHGEYSYDPAYHGPFLFHSTAA VFHFLGITDTTSRLVPVLFGVATILLLFLLKKELGKNGVLWSMFLLAFSPSMVYFSRFFRNDMIIIFCTLAAVTGAFRYL DSIHSLKRYPYLVLAASSLAVAVSSKENAYIILAVFGAYAGLGFLYWICSDWKKENMGLKETLRSKTSALLPYLPEIILS GALSVFIIMFFYSSAFRYDVSLFSIVERAFNHWMEMHSIERIGGPFYYYIPILLRYEIPVVLFGAAGFFYFLFNRVRNKG QNYSFFLFLCYWALTSLLLYSYIQEKVPWLVVHIVLPFGLLAGAFLGEVFSKKNKDGQPKKPDYPGKIRALLTVILVLTL LVFISQCISVNYYRSMEDEELITYTQASPDIRILMEKIEGFNESPDTLRIYVIDQYQLYWPLPWYLRDYERAAYSSKPPS SSKYDAIIVPISCDMYRELSEEEYSSYNFTLRPGRDFTLYYNNKLEQQ >Mature_528_residues MQKIPGYENTNSEVPDKKYWLYGLMIVFFALAFRLFELGERVLHHDESIHASFTLKLLEHGEYSYDPAYHGPFLFHSTAA VFHFLGITDTTSRLVPVLFGVATILLLFLLKKELGKNGVLWSMFLLAFSPSMVYFSRFFRNDMIIIFCTLAAVTGAFRYL DSIHSLKRYPYLVLAASSLAVAVSSKENAYIILAVFGAYAGLGFLYWICSDWKKENMGLKETLRSKTSALLPYLPEIILS GALSVFIIMFFYSSAFRYDVSLFSIVERAFNHWMEMHSIERIGGPFYYYIPILLRYEIPVVLFGAAGFFYFLFNRVRNKG QNYSFFLFLCYWALTSLLLYSYIQEKVPWLVVHIVLPFGLLAGAFLGEVFSKKNKDGQPKKPDYPGKIRALLTVILVLTL LVFISQCISVNYYRSMEDEELITYTQASPDIRILMEKIEGFNESPDTLRIYVIDQYQLYWPLPWYLRDYERAAYSSKPPS SSKYDAIIVPISCDMYRELSEEEYSSYNFTLRPGRDFTLYYNNKLEQQ
Specific function: Unknown
COG id: COG4745
COG function: function code O; Predicted membrane-bound mannosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61261; Mature: 61261
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKIPGYENTNSEVPDKKYWLYGLMIVFFALAFRLFELGERVLHHDESIHASFTLKLLEH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC GEYSYDPAYHGPFLFHSTAAVFHFLGITDTTSRLVPVLFGVATILLLFLLKKELGKNGVL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH WSMFLLAFSPSMVYFSRFFRNDMIIIFCTLAAVTGAFRYLDSIHSLKRYPYLVLAASSLA HHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHE VAVSSKENAYIILAVFGAYAGLGFLYWICSDWKKENMGLKETLRSKTSALLPYLPEIILS EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GALSVFIIMFFYSSAFRYDVSLFSIVERAFNHWMEMHSIERIGGPFYYYIPILLRYEIPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCE VLFGAAGFFYFLFNRVRNKGQNYSFFLFLCYWALTSLLLYSYIQEKVPWLVVHIVLPFGL EEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAGAFLGEVFSKKNKDGQPKKPDYPGKIRALLTVILVLTLLVFISQCISVNYYRSMEDEE HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC LITYTQASPDIRILMEKIEGFNESPDTLRIYVIDQYQLYWPLPWYLRDYERAAYSSKPPS EEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCC SSKYDAIIVPISCDMYRELSEEEYSSYNFTLRPGRDFTLYYNNKLEQQ CCCCCEEEEEECHHHHHHHCHHHHCCCCEEECCCCEEEEEECCCCCCC >Mature Secondary Structure MQKIPGYENTNSEVPDKKYWLYGLMIVFFALAFRLFELGERVLHHDESIHASFTLKLLEH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC GEYSYDPAYHGPFLFHSTAAVFHFLGITDTTSRLVPVLFGVATILLLFLLKKELGKNGVL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH WSMFLLAFSPSMVYFSRFFRNDMIIIFCTLAAVTGAFRYLDSIHSLKRYPYLVLAASSLA HHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHE VAVSSKENAYIILAVFGAYAGLGFLYWICSDWKKENMGLKETLRSKTSALLPYLPEIILS EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GALSVFIIMFFYSSAFRYDVSLFSIVERAFNHWMEMHSIERIGGPFYYYIPILLRYEIPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCE VLFGAAGFFYFLFNRVRNKGQNYSFFLFLCYWALTSLLLYSYIQEKVPWLVVHIVLPFGL EEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAGAFLGEVFSKKNKDGQPKKPDYPGKIRALLTVILVLTLLVFISQCISVNYYRSMEDEE HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC LITYTQASPDIRILMEKIEGFNESPDTLRIYVIDQYQLYWPLPWYLRDYERAAYSSKPPS EEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCC SSKYDAIIVPISCDMYRELSEEEYSSYNFTLRPGRDFTLYYNNKLEQQ CCCCCEEEEEECHHHHHHHCHHHHCCCCEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA