| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is napA [H]
Identifier: 21226936
GI number: 21226936
Start: 984394
End: 985539
Strand: Direct
Name: napA [H]
Synonym: MM_0834
Alternate gene names: 21226936
Gene position: 984394-985539 (Clockwise)
Preceding gene: 21226935
Following gene: 21226938
Centisome position: 24.03
GC content: 44.5
Gene sequence:
>1146_bases GTGAAATTTTTTGGTGAGATAGCAGAAAGGGCCGGAGTCCCCTCAGTTATGGGAGAAATTCTGGCTGGGATTCTGTTTGG AGCACTTTTTCTGGATGTGGAAACCGGGATAATAACTTTTTTTGCTCAGCTAGGGTCCATTTTCCTGCTTTTTACCGCAG GATATAAAGAAGTGAGCCTGAGGGACCTGAGACCCGCAGTACTGGTTGCCTTTATCCCTACTCTCACCCAGCTGGTTTTT GCCTTTGCATTCGGGTTCATGCTTGGGAAAATCTTTAATTTTACATTTCTTCAAAGCCTTTTTATGGCGGTTGCTCTCAG CCCGACAGCCATAGGAGTGGTTATCAGAATTCTTATAGACCTTAACTACCTGTCCAGCAGACCTGGCCTAGTAATGCTTT CTTCGGCGGTTCTGGACGATATTATAGCAATATCCCTTCTCTCCCTGATTGTTACCTTTGCCCGTTTTAACCGCGCACCT TCTGCCCTGGCAGTTCTTACAATCTCAGGAAAGATCCTGCTTTTCCTGCTGATTATGTACATCCTCGGAAAATATTTCTT TCCCAGGCTTTTTGTCCATGCCCAGAAAATGCACGCAAAAGAAGCAGTATTTTCCCTTGTGGTTATGACAGCCCTTTTTT CTTCCTATCTTGCAGAGTTATTTGAGCTTCATGCAACAATAGGAGCATTCATAGGAGGGATGTTAATTTCTGAAATTCCC CTTGCAAAGATTCCTGACGTGCAGAGCAAAGTAGAGGGACTGGCTTACGGGATTTTAATCCCACTTTTTTTCGCGTTCAT AGGATATTCAATTGATCTTTACGCCCTGGTAAAAGCAGGTATTTTCGTCCCTGTGGTCACCCTCCTGGCCCTCTCAGGAA AGCTGATAGGGGGATTCATAGGGTCAAAAGCCATAGGGTTCAATTTTTGCGAAAGCCTCGCATTTGGGGCAGGGGTCATG CCCAGGGCAGGAATAGAGCTTGTGATGCTGACAATAGGAAGAGGGATCGGAATTATAGGCGAAGAAATATTCTCAGCCAT GGTGTTTATGGTTATTGTGTCCATTCTGATTTCACCTTCGGCTTTGAAATTTGCGATCCAGGCAGAAAGAAAAAACAAAA CAGGCAATGAATTAAAGGTTGGATAA
Upstream 100 bases:
>100_bases GTTGTAAAAGGAAATTAAAAAATAAAAACAAACGTGTAAATAAGAACCGGGGGGTAAAGCAATAAGTGCTCTGTTTCAGG TACTGTTTCTCATTTTCAGC
Downstream 100 bases:
>100_bases GAGTGAACAACCCGGAAGTTGAAAAGAGCAGGAGCATGAGTTTTAAGAATAGGGCACGAAAAAATACCCCTGCACCGCTT ATAAGGTTCCCTTTAATCAG
Product: Na(+)/H(+) antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKFFGEIAERAGVPSVMGEILAGILFGALFLDVETGIITFFAQLGSIFLLFTAGYKEVSLRDLRPAVLVAFIPTLTQLVF AFAFGFMLGKIFNFTFLQSLFMAVALSPTAIGVVIRILIDLNYLSSRPGLVMLSSAVLDDIIAISLLSLIVTFARFNRAP SALAVLTISGKILLFLLIMYILGKYFFPRLFVHAQKMHAKEAVFSLVVMTALFSSYLAELFELHATIGAFIGGMLISEIP LAKIPDVQSKVEGLAYGILIPLFFAFIGYSIDLYALVKAGIFVPVVTLLALSGKLIGGFIGSKAIGFNFCESLAFGAGVM PRAGIELVMLTIGRGIGIIGEEIFSAMVFMVIVSILISPSALKFAIQAERKNKTGNELKVG
Sequences:
>Translated_381_residues MKFFGEIAERAGVPSVMGEILAGILFGALFLDVETGIITFFAQLGSIFLLFTAGYKEVSLRDLRPAVLVAFIPTLTQLVF AFAFGFMLGKIFNFTFLQSLFMAVALSPTAIGVVIRILIDLNYLSSRPGLVMLSSAVLDDIIAISLLSLIVTFARFNRAP SALAVLTISGKILLFLLIMYILGKYFFPRLFVHAQKMHAKEAVFSLVVMTALFSSYLAELFELHATIGAFIGGMLISEIP LAKIPDVQSKVEGLAYGILIPLFFAFIGYSIDLYALVKAGIFVPVVTLLALSGKLIGGFIGSKAIGFNFCESLAFGAGVM PRAGIELVMLTIGRGIGIIGEEIFSAMVFMVIVSILISPSALKFAIQAERKNKTGNELKVG >Mature_381_residues MKFFGEIAERAGVPSVMGEILAGILFGALFLDVETGIITFFAQLGSIFLLFTAGYKEVSLRDLRPAVLVAFIPTLTQLVF AFAFGFMLGKIFNFTFLQSLFMAVALSPTAIGVVIRILIDLNYLSSRPGLVMLSSAVLDDIIAISLLSLIVTFARFNRAP SALAVLTISGKILLFLLIMYILGKYFFPRLFVHAQKMHAKEAVFSLVVMTALFSSYLAELFELHATIGAFIGGMLISEIP LAKIPDVQSKVEGLAYGILIPLFFAFIGYSIDLYALVKAGIFVPVVTLLALSGKLIGGFIGSKAIGFNFCESLAFGAGVM PRAGIELVMLTIGRGIGIIGEEIFSAMVFMVIVSILISPSALKFAIQAERKNKTGNELKVG
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=377, Percent_Identity=24.9336870026525, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 41076; Mature: 41076
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFGEIAERAGVPSVMGEILAGILFGALFLDVETGIITFFAQLGSIFLLFTAGYKEVSL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RDLRPAVLVAFIPTLTQLVFAFAFGFMLGKIFNFTFLQSLFMAVALSPTAIGVVIRILID HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LNYLSSRPGLVMLSSAVLDDIIAISLLSLIVTFARFNRAPSALAVLTISGKILLFLLIMY HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH ILGKYFFPRLFVHAQKMHAKEAVFSLVVMTALFSSYLAELFELHATIGAFIGGMLISEIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAKIPDVQSKVEGLAYGILIPLFFAFIGYSIDLYALVKAGIFVPVVTLLALSGKLIGGFI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSKAIGFNFCESLAFGAGVMPRAGIELVMLTIGRGIGIIGEEIFSAMVFMVIVSILISPS CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH ALKFAIQAERKNKTGNELKVG HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKFFGEIAERAGVPSVMGEILAGILFGALFLDVETGIITFFAQLGSIFLLFTAGYKEVSL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RDLRPAVLVAFIPTLTQLVFAFAFGFMLGKIFNFTFLQSLFMAVALSPTAIGVVIRILID HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LNYLSSRPGLVMLSSAVLDDIIAISLLSLIVTFARFNRAPSALAVLTISGKILLFLLIMY HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH ILGKYFFPRLFVHAQKMHAKEAVFSLVVMTALFSSYLAELFELHATIGAFIGGMLISEIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAKIPDVQSKVEGLAYGILIPLFFAFIGYSIDLYALVKAGIFVPVVTLLALSGKLIGGFI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSKAIGFNFCESLAFGAGVMPRAGIELVMLTIGRGIGIIGEEIFSAMVFMVIVSILISPS CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH ALKFAIQAERKNKTGNELKVG HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]