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The map label for this gene is nifB [H]

Identifier: 21226861

GI number: 21226861

Start: 907613

End: 908620

Strand: Direct

Name: nifB [H]

Synonym: MM_0759

Alternate gene names: 21226861

Gene position: 907613-908620 (Clockwise)

Preceding gene: 21226860

Following gene: 21226863

Centisome position: 22.16

GC content: 47.42

Gene sequence:

>1008_bases
GTGCCTTTCCCGAGTGCATCTGATTGCTCACTCCAGGACCCATCTGCCGGAGGAAAAAATTTGTTAGAAGAAGAAAACTT
CACATTTGACCGTGACCGTTATAGAATCATAGCCGAACACCCCTGCTATAGTGAAAACGCCAGGCACAGGTTCGGAAGAA
TGCACCTTGCAGTAGCCCCCAAATGTAATATCCAGTGCAATTTCTGCGTCAGGGACTTTGCCTGCGTAAACGAAAACAGG
CCTGGAGTGACCATGGAGATCTTAACACCAGCCGAAGCACTTGAAAAAGTAAGACAAGCCCTTTCAGACTATCCGTTTAT
CAAAGTAATAGGGGTTGCCGGGCCCGGTGATCCGTTAGCAAACGAAGAGACTTTCGAAGCCCTCAGGCTTGTAAGGCAGG
AGTTCCCTAATATCACATTTTGTATGAGCACAAACGGACTCATGCTCCCGGAAAAACTCCCGGAACTTGTAAAGCTTGGA
GTCGCAACCCTGACCGTAACCATCAACGCTGTTGACCCCGAAATCCAGGGACAGATATGTGAATACGTCAATTACCATGG
CAAGATTTACAGAGGAGTAGAAGGGGCAAGAATCCAGATAAAAAACCAGCTTGACGGTATCGAGGCTGCTGTCCGGGAAG
GGATTGTTATCAAGGTCAATACTGTGCTTGTACCGGGAATAAATGACGGGCACGTAGTGGAAATTGCAAAAGCAGTTAGA
GAAAGAGAAGTATATATTATGAATATTATGTCCCTGATCCCCCAGGGAGCCTTTGCTCATATAAGAGCCCCGACCCCGGA
AGAAAGGCAGGCAACCCAGGACGCTTGCGAACCCTATGTTAGACAGATGCGCCATTGCAGGCAATGCCGAGCCGATGCCT
ATGGTTACATTGATCAGGACATGTCACAGATGAGCGAGGAGCGCAGAAACCTTATAAAAATCCAGATAAGAGAAGACCTT
GAAAAAGCAAAAGAGACTCTGAATAAGAACGGGAAAGAAGAGTCCTGA

Upstream 100 bases:

>100_bases
CTTACTTTTTAGACCTGTCATCTTTCCGAAAACTGCATCCGGCGCAAAAACCGTATGAATTATATATTATGCATAAATAT
GCATAATTGGTGAAAATATT

Downstream 100 bases:

>100_bases
GTAACTTAATAATTTTATTATTTCAGCCCGGGTTCAGGAAAAGACCTGAAATAAGAAAAGCTCAAAAACCCTGGCCTGAA
TGGCGGAGTTTGGAAACCCC

Product: NifB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MPFPSASDCSLQDPSAGGKNLLEEENFTFDRDRYRIIAEHPCYSENARHRFGRMHLAVAPKCNIQCNFCVRDFACVNENR
PGVTMEILTPAEALEKVRQALSDYPFIKVIGVAGPGDPLANEETFEALRLVRQEFPNITFCMSTNGLMLPEKLPELVKLG
VATLTVTINAVDPEIQGQICEYVNYHGKIYRGVEGARIQIKNQLDGIEAAVREGIVIKVNTVLVPGINDGHVVEIAKAVR
EREVYIMNIMSLIPQGAFAHIRAPTPEERQATQDACEPYVRQMRHCRQCRADAYGYIDQDMSQMSEERRNLIKIQIREDL
EKAKETLNKNGKEES

Sequences:

>Translated_335_residues
MPFPSASDCSLQDPSAGGKNLLEEENFTFDRDRYRIIAEHPCYSENARHRFGRMHLAVAPKCNIQCNFCVRDFACVNENR
PGVTMEILTPAEALEKVRQALSDYPFIKVIGVAGPGDPLANEETFEALRLVRQEFPNITFCMSTNGLMLPEKLPELVKLG
VATLTVTINAVDPEIQGQICEYVNYHGKIYRGVEGARIQIKNQLDGIEAAVREGIVIKVNTVLVPGINDGHVVEIAKAVR
EREVYIMNIMSLIPQGAFAHIRAPTPEERQATQDACEPYVRQMRHCRQCRADAYGYIDQDMSQMSEERRNLIKIQIREDL
EKAKETLNKNGKEES
>Mature_334_residues
PFPSASDCSLQDPSAGGKNLLEEENFTFDRDRYRIIAEHPCYSENARHRFGRMHLAVAPKCNIQCNFCVRDFACVNENRP
GVTMEILTPAEALEKVRQALSDYPFIKVIGVAGPGDPLANEETFEALRLVRQEFPNITFCMSTNGLMLPEKLPELVKLGV
ATLTVTINAVDPEIQGQICEYVNYHGKIYRGVEGARIQIKNQLDGIEAAVREGIVIKVNTVLVPGINDGHVVEIAKAVRE
REVYIMNIMSLIPQGAFAHIRAPTPEERQATQDACEPYVRQMRHCRQCRADAYGYIDQDMSQMSEERRNLIKIQIREDLE
KAKETLNKNGKEES

Specific function: Probably involved in the synthesis of the Fe-Mo cofactor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moaA/nifB/pqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR005980
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37768; Mature: 37636

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPSASDCSLQDPSAGGKNLLEEENFTFDRDRYRIIAEHPCYSENARHRFGRMHLAVAP
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCEEEEECC
KCNIQCNFCVRDFACVNENRPGVTMEILTPAEALEKVRQALSDYPFIKVIGVAGPGDPLA
CCCCEEEEEHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
NEETFEALRLVRQEFPNITFCMSTNGLMLPEKLPELVKLGVATLTVTINAVDPEIQGQIC
CHHHHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHCCEEEEEEEEEECCCHHHHHHH
EYVNYHGKIYRGVEGARIQIKNQLDGIEAAVREGIVIKVNTVLVPGINDGHVVEIAKAVR
HHHHCCCEEEECCCCCEEEEHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHH
EREVYIMNIMSLIPQGAFAHIRAPTPEERQATQDACEPYVRQMRHCRQCRADAYGYIDQD
HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
MSQMSEERRNLIKIQIREDLEKAKETLNKNGKEES
HHHHHHHHHCEEEEEHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PFPSASDCSLQDPSAGGKNLLEEENFTFDRDRYRIIAEHPCYSENARHRFGRMHLAVAP
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCEEEEECC
KCNIQCNFCVRDFACVNENRPGVTMEILTPAEALEKVRQALSDYPFIKVIGVAGPGDPLA
CCCCEEEEEHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
NEETFEALRLVRQEFPNITFCMSTNGLMLPEKLPELVKLGVATLTVTINAVDPEIQGQIC
CHHHHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHCCEEEEEEEEEECCCHHHHHHH
EYVNYHGKIYRGVEGARIQIKNQLDGIEAAVREGIVIKVNTVLVPGINDGHVVEIAKAVR
HHHHCCCEEEECCCCCEEEEHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHH
EREVYIMNIMSLIPQGAFAHIRAPTPEERQATQDACEPYVRQMRHCRQCRADAYGYIDQD
HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
MSQMSEERRNLIKIQIREDLEKAKETLNKNGKEES
HHHHHHHHHCEEEEEHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7496536 [H]