| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226860
Identifier: 21226860
GI number: 21226860
Start: 907365
End: 907598
Strand: Direct
Name: 21226860
Synonym: MM_0758
Alternate gene names: NA
Gene position: 907365-907598 (Clockwise)
Preceding gene: 21226859
Following gene: 21226861
Centisome position: 22.15
GC content: 37.61
Gene sequence:
>234_bases GTGCATGCAGGATTTTTAGCATACAGTGCTTTTTTCCAGGGCGAAGGGTATCTTTTCCTTACAAATGCTTTCCTTTACAG GACTGTTATTCGCTTCTCAAAATCGCTGTTTTTTCTGAGGACCTGCTATTTCTTTCTTAAACATGCTGCTTACTTTTTAG ACCTGTCATCTTTCCGAAAACTGCATCCGGCGCAAAAACCGTATGAATTATATATTATGCATAAATATGCATAA
Upstream 100 bases:
>100_bases TAAAAGAATTATTCAACCGGCTCGGATTCTGGTTCATCGAGCCGGCTTAGTCATCTTTTTTACTCGAGCTGCAGACTCAA TGGCTATGGGTTTCTTTCTT
Downstream 100 bases:
>100_bases TTGGTGAAAATATTGTGCCTTTCCCGAGTGCATCTGATTGCTCACTCCAGGACCCATCTGCCGGAGGAAAAAATTTGTTA GAAGAAGAAAACTTCACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MHAGFLAYSAFFQGEGYLFLTNAFLYRTVIRFSKSLFFLRTCYFFLKHAAYFLDLSSFRKLHPAQKPYELYIMHKYA
Sequences:
>Translated_77_residues MHAGFLAYSAFFQGEGYLFLTNAFLYRTVIRFSKSLFFLRTCYFFLKHAAYFLDLSSFRKLHPAQKPYELYIMHKYA >Mature_77_residues MHAGFLAYSAFFQGEGYLFLTNAFLYRTVIRFSKSLFFLRTCYFFLKHAAYFLDLSSFRKLHPAQKPYELYIMHKYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9256; Mature: 9256
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAGFLAYSAFFQGEGYLFLTNAFLYRTVIRFSKSLFFLRTCYFFLKHAAYFLDLSSFRK CCCCHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHPAQKPYELYIMHKYA CCCCCCCEEEEEEEECC >Mature Secondary Structure MHAGFLAYSAFFQGEGYLFLTNAFLYRTVIRFSKSLFFLRTCYFFLKHAAYFLDLSSFRK CCCCHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHPAQKPYELYIMHKYA CCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA