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The map label for this gene is nifB [H]

Identifier: 21226859

GI number: 21226859

Start: 906242

End: 907228

Strand: Direct

Name: nifB [H]

Synonym: MM_0757

Alternate gene names: 21226859

Gene position: 906242-907228 (Clockwise)

Preceding gene: 21226858

Following gene: 21226860

Centisome position: 22.12

GC content: 46.4

Gene sequence:

>987_bases
TTGCCAGAAGAAAATCAATCTGTAGACAATGCGAATAAAGGCCCCATACTTGGAGAGGAAATCCGCAGAAAGATCTCCGA
ACACCCCTGTTACGATAAAAATGCTCAGCATAAGTTTGGGAGAATCCACCTTGCTGTAGCCCCCAAGTGCAACATCCAGT
GTAATTTTTGTGTAAGGGAATTTGACTGCGTAAACGAGAGCCGTCCGGGAGTTACAAGTAAAGTCCTGAGTCCTCGGGAA
GCCCTTGAAAAAACCAGGCAGATCCTGGCAGATTATCCGTTCATCAAAGTTGTTGCAATTGCAGGACCTGGCGACCCTCT
GGCTAACGATGAAACATTTGAGACATTTGAACTTATAAGGAAGGAATTTCCTGAGGTGACCCTCTGCATGAGCACAAACG
GGCTTATGCTCCCTGAAAAACTTCCGGACATGCTGCGTGTTGGGGTTTCCACTCTGACAGTTACGGTAAACGCAATCGAT
CCCGAAATCCAGGCAAAAATAGTGAACCATGTAGTATATCACGGAAAAGTCTACAGAGGAGTCGAAGCTGCCGAGATTCA
GATCAAAAACCAGCTTGAGGGAATAAAGGCGGCTATTGATGCAGGAATCGTTGTCAAGGTCAATACCGTGCTTATACCGG
GAATTAATGATAAGCATGTGGTAGAGATTGCCAGAAAGCTCAATGAGCTCGGGGTCTACATCATGAATGTCATGCCTCTG
ATCAACCAGGGAGCATTTGCACATCTTGAGCCTCCAACTGCCGAAGAGCGGAAAGCCGTTCAGGAAGCCTGCGAACCTTA
TGTTATGCAGATGCGCCACTGCAGACAGTGCAGATCCGATGCTTACGGACTCCTTGCCCAGGACATGTCACAGATGAGTG
AGGAGCGCAGAAACCTTATAAAAATCCAAACAAAAGAAGACTTTGAAAAAGCAAAAGAAGTTCTGAAAACGAACGGGAAA
GAAGAAGCTGAAGGCAAAAAAGCCTGA

Upstream 100 bases:

>100_bases
ACATAGAATCCCTATTTAGTGTAGAATCCCTACTGGAGTAGAATCCTTATTTAGTGTAGAATCTCACATTCATTTTACAT
TTCGAACGGAGGAGAAAGAT

Downstream 100 bases:

>100_bases
ATCTGACTTATCCTGCTCCAAAAGACTTCCGGCTTTTAAAAGAATTATTCAACCGGCTCGGATTCTGGTTCATCGAGCCG
GCTTAGTCATCTTTTTTACT

Product: NifB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPEENQSVDNANKGPILGEEIRRKISEHPCYDKNAQHKFGRIHLAVAPKCNIQCNFCVREFDCVNESRPGVTSKVLSPRE
ALEKTRQILADYPFIKVVAIAGPGDPLANDETFETFELIRKEFPEVTLCMSTNGLMLPEKLPDMLRVGVSTLTVTVNAID
PEIQAKIVNHVVYHGKVYRGVEAAEIQIKNQLEGIKAAIDAGIVVKVNTVLIPGINDKHVVEIARKLNELGVYIMNVMPL
INQGAFAHLEPPTAEERKAVQEACEPYVMQMRHCRQCRSDAYGLLAQDMSQMSEERRNLIKIQTKEDFEKAKEVLKTNGK
EEAEGKKA

Sequences:

>Translated_328_residues
MPEENQSVDNANKGPILGEEIRRKISEHPCYDKNAQHKFGRIHLAVAPKCNIQCNFCVREFDCVNESRPGVTSKVLSPRE
ALEKTRQILADYPFIKVVAIAGPGDPLANDETFETFELIRKEFPEVTLCMSTNGLMLPEKLPDMLRVGVSTLTVTVNAID
PEIQAKIVNHVVYHGKVYRGVEAAEIQIKNQLEGIKAAIDAGIVVKVNTVLIPGINDKHVVEIARKLNELGVYIMNVMPL
INQGAFAHLEPPTAEERKAVQEACEPYVMQMRHCRQCRSDAYGLLAQDMSQMSEERRNLIKIQTKEDFEKAKEVLKTNGK
EEAEGKKA
>Mature_327_residues
PEENQSVDNANKGPILGEEIRRKISEHPCYDKNAQHKFGRIHLAVAPKCNIQCNFCVREFDCVNESRPGVTSKVLSPREA
LEKTRQILADYPFIKVVAIAGPGDPLANDETFETFELIRKEFPEVTLCMSTNGLMLPEKLPDMLRVGVSTLTVTVNAIDP
EIQAKIVNHVVYHGKVYRGVEAAEIQIKNQLEGIKAAIDAGIVVKVNTVLIPGINDKHVVEIARKLNELGVYIMNVMPLI
NQGAFAHLEPPTAEERKAVQEACEPYVMQMRHCRQCRSDAYGLLAQDMSQMSEERRNLIKIQTKEDFEKAKEVLKTNGKE
EAEGKKA

Specific function: Probably involved in the synthesis of the Fe-Mo cofactor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moaA/nifB/pqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR005980
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36731; Mature: 36600

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEENQSVDNANKGPILGEEIRRKISEHPCYDKNAQHKFGRIHLAVAPKCNIQCNFCVRE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHH
FDCVNESRPGVTSKVLSPREALEKTRQILADYPFIKVVAIAGPGDPLANDETFETFELIR
HHHCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
KEFPEVTLCMSTNGLMLPEKLPDMLRVGVSTLTVTVNAIDPEIQAKIVNHVVYHGKVYRG
HHCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCC
VEAAEIQIKNQLEGIKAAIDAGIVVKVNTVLIPGINDKHVVEIARKLNELGVYIMNVMPL
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
INQGAFAHLEPPTAEERKAVQEACEPYVMQMRHCRQCRSDAYGLLAQDMSQMSEERRNLI
HCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
KIQTKEDFEKAKEVLKTNGKEEAEGKKA
EEECHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PEENQSVDNANKGPILGEEIRRKISEHPCYDKNAQHKFGRIHLAVAPKCNIQCNFCVRE
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHH
FDCVNESRPGVTSKVLSPREALEKTRQILADYPFIKVVAIAGPGDPLANDETFETFELIR
HHHCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
KEFPEVTLCMSTNGLMLPEKLPDMLRVGVSTLTVTVNAIDPEIQAKIVNHVVYHGKVYRG
HHCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCC
VEAAEIQIKNQLEGIKAAIDAGIVVKVNTVLIPGINDKHVVEIARKLNELGVYIMNVMPL
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
INQGAFAHLEPPTAEERKAVQEACEPYVMQMRHCRQCRSDAYGLLAQDMSQMSEERRNLI
HCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
KIQTKEDFEKAKEVLKTNGKEEAEGKKA
EEECHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7496536 [H]