Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is yceA [C]

Identifier: 21226452

GI number: 21226452

Start: 457470

End: 458210

Strand: Direct

Name: yceA [C]

Synonym: MM_0350

Alternate gene names: 21226452

Gene position: 457470-458210 (Clockwise)

Preceding gene: 21226451

Following gene: 21226453

Centisome position: 11.17

GC content: 44.26

Gene sequence:

>741_bases
ATGATCATTCCGGGAATTGCCGCCGCAGAGACCTGTCCAGATGGATATAAAAATGTGAGTGTTTGTAAAGCTGAAAAGAT
GGTCGAAAAAGAAGACGTATTTCTTCTGGATGTGCGTACTCCTGCTGAATTTAATAAAACACATATTGAGGGCACGATAC
TTATTCCTGTGAAAAATGTACCTGCACAGGACCCTGTAGAATTATCCTCTGATGAACTGCTGGAAGTGAGAATAAATGAA
GTGCCAGCCGATGAAAAAATACTTGTTTACTGCAAGAGTGGTGCCAGAAGTGCCGCTGCATGCAGTTTACTTGTCAGCAA
CGGATACAGGAAAGTCTATAATATGAGAGGAGGCATTGACTGCTGGTTAGCCAGAGGGTGTACTGTAGATGTAAACGCCG
ATAAAGCTGATGAACTGCTCGGTACAGGGGAGTTCTTCCTTCTGGATGTGCGCACTCCGGCTGAATTTAATGCAGGGTAT
ATTGAGGGGGCAATATTGATTCCACTGAAAAATGTTCCAAAGGAAGACCCGGTTGAATTACCCCCGGAAAAGCTCTTAGC
TCAATGCCTCTGTGAAATTCCGGAAAATAAGCCTATTCTGGTTTATTGCAAGAGTGGGACAAGAAGCGATGCTGCAAGAG
ATTTACTGGTAGATTCAGGTTACAGGCATGTCTATAATTTGGAAGGCGGCATCCTCACCTGGAAAGCTGAGGGATACCCT
ACAGTTTGTCCAGCTATTTGA

Upstream 100 bases:

>100_bases
ACTTTCAGGTTTATGAATTTAATGAATTACAGAATGTGGAGGGATGTAACTGAATAAACGAACTATGTTTTATTTTGCTG
CGGTCCTTATGGCATTTCTC

Downstream 100 bases:

>100_bases
GATTAAAAAACTCTTCAATTTTTTCCTTTTTTATATTTTTATAATCCTTTTCCTAATCCTTTTCCTTTTTACTTTTTAAA
GATTTTTTATCCGAAGTATA

Product: putative molybdopterin biosynthesis protein

Products: NA

Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Domain-Containing Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Rhodanese-Like Protein; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Rhodanese-Like Domain Protein; Metallo-Beta-Lactamase Family Protein; Rhodanese Family Protein; Hydrolase; Phage Prohead Protease; Phage Shock Protein; Rhodanese Homology Domain Superfamily Protein; Sulfur Transferase Selenocysteine-Containing; Phage Shock Protein E; Pyridine Nucleotide Oxidoreductase; Rhodanese-Like Family Protein; Molybdopterin Biosynthesis Protein; Metallo-Beta-Lactamase Superfamily Protein; Thioredoxin; Rhodanese-Related Sulfurtransferase; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNVPAQDPVELSSDELLEVRINE
VPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGIDCWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGY
IEGAILIPLKNVPKEDPVELPPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP
TVCPAI

Sequences:

>Translated_246_residues
MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNVPAQDPVELSSDELLEVRINE
VPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGIDCWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGY
IEGAILIPLKNVPKEDPVELPPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP
TVCPAI
>Mature_246_residues
MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNVPAQDPVELSSDELLEVRINE
VPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGIDCWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGY
IEGAILIPLKNVPKEDPVELPPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP
TVCPAI

Specific function: Unknown. [C]

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26872; Mature: 26872

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECEEEEEEECCC
PAQDPVELSSDELLEVRINEVPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGID
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEHHCCCCEE
CWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGYIEGAILIPLKNVPKEDPVEL
EEEECCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCCCCC
PPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP
CHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECCCCC
TVCPAI
CCCCCC
>Mature Secondary Structure
MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECEEEEEEECCC
PAQDPVELSSDELLEVRINEVPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGID
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEHHCCCCEE
CWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGYIEGAILIPLKNVPKEDPVEL
EEEECCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCCCCC
PPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP
CHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECCCCC
TVCPAI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA