Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226182

Identifier: 21226182

GI number: 21226182

Start: 106128

End: 107258

Strand: Reverse

Name: 21226182

Synonym: MM_0080

Alternate gene names: NA

Gene position: 107258-106128 (Counterclockwise)

Preceding gene: 21226183

Following gene: 21226180

Centisome position: 2.62

GC content: 43.94

Gene sequence:

>1131_bases
GTGATTTTGTCGCTCCTTTTAATTTGCTTTACAGACGTATCAGGAGCGAAACCGAGCAGCGGGCATTCAGGAAATACAGG
ATTTCCGGACTACACTGAAGGCGCGCAATACGATACTGATTTCGATGCCAGCTTTATGTCGGAATGGTGGTACCAGAATG
GGGATATGAGGCTTGTTGGGGAAGATGGAGATGTGAAAAATCTTGCTTTTTTTACCGTACTTGTTCACCAGGAATCTCCA
ACGTTTTTTTATGATTCAAAATCAGATACGCAGCTTTCGAATATGGTAACTTTCTATGGGCTTTATCCTTATGGGGAGGA
GCCTTCTGACAACTATACCCTGGTTTTTGTGCCGAGGGATGAAATAGAAACCTATATCGGGTTTCATAAGCCATACCTTG
ATTTCACTTACCCTGAAGGTTTAAGGAAATTTTACGGTTCGGCGTTTAAAGGATACAATCTGGATTACGCTTACGACAAC
GTTCAGTTGGACCTGTTTTTCAAACCTCTCGCAGAAAAAACGATCGACAGTGCAACAGATCCCGTCAATTTTACCACATA
CGAATATGCTTATGGAAAACTTCACGGCAGTGTTATGCTTGACGGCAAAAAATATAGAGTTACGCAGGCTGACGGGTACT
TTGACCACATGACCCCCTATACAAGGGACCAGCCTGTATGGGAATGGGAGCTTCATGGGTGGAGCTGGTCAGAACTTACA
ACTGACAGTTATCAGACTGTGTTCTATGGGGTAAGAGGATCTGATGGGTGTGATGATTATGAATATAAGCACCTGACCCT
GATAGACAAAAATAAAGGTAAGGTAATTGCAGAATACTCAGGTGACGAAGTAATCATCAGCGAAAGTGACTGGACAGAAG
CGAAAGTCAAAGAGCAGACCGTGGAAAGACCAGCCAGCCTTCAAATATCGGCTCCTGACCTGAATATCTCCATAAATGCA
GAAAGTGTTATCCAGCTTGATAGGTCATCTCAGGAAGAGCCTGTGGGATTTGTTGATTTCATGTCTTTCCAGCCCGATGA
GGCAACAATTGAGTACAGGGGTGATCTTGAACAGGGAAGCGCCTTCTATGAATATATGGTTTCTGACCGGGTTATTTTCC
CGCCGCAGTAA

Upstream 100 bases:

>100_bases
CCTCGATTTTTAAAGTCACAGGACGCCTCAAAAACGGGCTTCAATAACAGGAATAAGAAACAGAGGAGAGAGTTATTTGA
ACCCGAAGTATCTTAAAATA

Downstream 100 bases:

>100_bases
ATACGGTGCAGGTTTACAGAAATAAGGTTCTGAAGGCAAGTTCACATGGTCTTGAATTTTCAGGGGATTTTCCCCCTTTT
CATATTTTTGTCCTGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MILSLLLICFTDVSGAKPSSGHSGNTGFPDYTEGAQYDTDFDASFMSEWWYQNGDMRLVGEDGDVKNLAFFTVLVHQESP
TFFYDSKSDTQLSNMVTFYGLYPYGEEPSDNYTLVFVPRDEIETYIGFHKPYLDFTYPEGLRKFYGSAFKGYNLDYAYDN
VQLDLFFKPLAEKTIDSATDPVNFTTYEYAYGKLHGSVMLDGKKYRVTQADGYFDHMTPYTRDQPVWEWELHGWSWSELT
TDSYQTVFYGVRGSDGCDDYEYKHLTLIDKNKGKVIAEYSGDEVIISESDWTEAKVKEQTVERPASLQISAPDLNISINA
ESVIQLDRSSQEEPVGFVDFMSFQPDEATIEYRGDLEQGSAFYEYMVSDRVIFPPQ

Sequences:

>Translated_376_residues
MILSLLLICFTDVSGAKPSSGHSGNTGFPDYTEGAQYDTDFDASFMSEWWYQNGDMRLVGEDGDVKNLAFFTVLVHQESP
TFFYDSKSDTQLSNMVTFYGLYPYGEEPSDNYTLVFVPRDEIETYIGFHKPYLDFTYPEGLRKFYGSAFKGYNLDYAYDN
VQLDLFFKPLAEKTIDSATDPVNFTTYEYAYGKLHGSVMLDGKKYRVTQADGYFDHMTPYTRDQPVWEWELHGWSWSELT
TDSYQTVFYGVRGSDGCDDYEYKHLTLIDKNKGKVIAEYSGDEVIISESDWTEAKVKEQTVERPASLQISAPDLNISINA
ESVIQLDRSSQEEPVGFVDFMSFQPDEATIEYRGDLEQGSAFYEYMVSDRVIFPPQ
>Mature_376_residues
MILSLLLICFTDVSGAKPSSGHSGNTGFPDYTEGAQYDTDFDASFMSEWWYQNGDMRLVGEDGDVKNLAFFTVLVHQESP
TFFYDSKSDTQLSNMVTFYGLYPYGEEPSDNYTLVFVPRDEIETYIGFHKPYLDFTYPEGLRKFYGSAFKGYNLDYAYDN
VQLDLFFKPLAEKTIDSATDPVNFTTYEYAYGKLHGSVMLDGKKYRVTQADGYFDHMTPYTRDQPVWEWELHGWSWSELT
TDSYQTVFYGVRGSDGCDDYEYKHLTLIDKNKGKVIAEYSGDEVIISESDWTEAKVKEQTVERPASLQISAPDLNISINA
ESVIQLDRSSQEEPVGFVDFMSFQPDEATIEYRGDLEQGSAFYEYMVSDRVIFPPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43106; Mature: 43106

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSLLLICFTDVSGAKPSSGHSGNTGFPDYTEGAQYDTDFDASFMSEWWYQNGDMRLVG
CHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
EDGDVKNLAFFTVLVHQESPTFFYDSKSDTQLSNMVTFYGLYPYGEEPSDNYTLVFVPRD
CCCCCCEEEEEEEEEECCCCCEEECCCCCCHHHHEEEEEEEECCCCCCCCCEEEEEEEHH
EIETYIGFHKPYLDFTYPEGLRKFYGSAFKGYNLDYAYDNVQLDLFFKPLAEKTIDSATD
HHHHHHCCCCCCCCCCCHHHHHHHHCCHHCCCCCEEEECCEEEEEEECHHHHHHHHCCCC
PVNFTTYEYAYGKLHGSVMLDGKKYRVTQADGYFDHMTPYTRDQPVWEWELHGWSWSELT
CCCEEEEEEEEEEEECEEEECCCEEEEEECCCCHHHCCCCCCCCCCEEEEECCEEHHCCC
TDSYQTVFYGVRGSDGCDDYEYKHLTLIDKNKGKVIAEYSGDEVIISESDWTEAKVKEQT
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHH
VERPASLQISAPDLNISINAESVIQLDRSSQEEPVGFVDFMSFQPDEATIEYRGDLEQGS
HCCCCEEEEECCCEEEEECHHHEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCC
AFYEYMVSDRVIFPPQ
HHHHHHHCCEEECCCC
>Mature Secondary Structure
MILSLLLICFTDVSGAKPSSGHSGNTGFPDYTEGAQYDTDFDASFMSEWWYQNGDMRLVG
CHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
EDGDVKNLAFFTVLVHQESPTFFYDSKSDTQLSNMVTFYGLYPYGEEPSDNYTLVFVPRD
CCCCCCEEEEEEEEEECCCCCEEECCCCCCHHHHEEEEEEEECCCCCCCCCEEEEEEEHH
EIETYIGFHKPYLDFTYPEGLRKFYGSAFKGYNLDYAYDNVQLDLFFKPLAEKTIDSATD
HHHHHHCCCCCCCCCCCHHHHHHHHCCHHCCCCCEEEECCEEEEEEECHHHHHHHHCCCC
PVNFTTYEYAYGKLHGSVMLDGKKYRVTQADGYFDHMTPYTRDQPVWEWELHGWSWSELT
CCCEEEEEEEEEEEECEEEECCCEEEEEECCCCHHHCCCCCCCCCCEEEEECCEEHHCCC
TDSYQTVFYGVRGSDGCDDYEYKHLTLIDKNKGKVIAEYSGDEVIISESDWTEAKVKEQT
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHH
VERPASLQISAPDLNISINAESVIQLDRSSQEEPVGFVDFMSFQPDEATIEYRGDLEQGS
HCCCCEEEEECCCEEEEECHHHEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCC
AFYEYMVSDRVIFPPQ
HHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA