Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224845

Identifier: 212224845

GI number: 212224845

Start: 1558440

End: 1559579

Strand: Reverse

Name: 212224845

Synonym: TON_1694

Alternate gene names: NA

Gene position: 1559579-1558440 (Counterclockwise)

Preceding gene: 212224846

Following gene: 212224843

Centisome position: 84.41

GC content: 52.11

Gene sequence:

>1140_bases
ATGAACAGCACGCTCACCATGATGATCATTGGCATCCTAGCATTTTGGGCCGTGCTCTACGCCCTCTTCGGGAGAAAATA
CGACGAAGAGAATGAAGAGGGCTTGGCTGTTGACCTTTTCATAGCTATGTGGCGAACAAAGAAACTGTTAGGCTTTATAG
ACAATCTCGCCCATAGATGGAAGCGCTTCTGGAGGGTTTATGGAGATATAGGAATAGCCCTCGGCTTCCTTGGCATGGCC
TATGTCTTCTACGCCCTCCTAAAGACCGCGATGAATACGATACAGACCGGAGGCGAGCAGGCCGGAGTCCAGCTTGTGAT
ACCAGGCATTACGATTCCCCTCTCATACGGCCTGATAGCCCTTGTAGTTGTCATGGTCGTCCACGAGCTGAGTCATGGAG
TAGTCGCAAGGGCTGAAAATCTGCCCCTAAAGTCAGTCGGCTTGGTTCTTCTCGCCGTAATCCCCGGTGCCTTTGTTGAG
CCCGACGAGGAGGCCCTTGAGAAAGCCCCACTGAGAACGAGGCTGAGGGTTTACGGCGCAGGCTCGCTCGCCAACATAGT
GACGGCTCTGATAGCGGTTCTCATAATCAACTTCGCAATAACCCCGGTTCTCCAGCCGGCAGGAATACTCGTCTCTGGAG
TCCTTGAAGACGGTCCCGCTTACGGCGTTCTCCAGCAGGGGGATGTAATAATCGCAATGGACGGTCAGCAGATCAAGGAC
ATGGAGCAGTTCATTAATTTCATGAACACGACTAAGCCAGGCCAAGTGCTGACAATCACCGTATTGAGGGGCGGGAATGA
AATAAACCTCCAGCTGAAGCTCGGAGCGCACCCGGATAACCCGGAAAGAGGTTATATTGGTATTTATCCAGCACCACACT
ACGTCTCAAAGGTAGGACACGAGAACATAATCTTTCCGCTGTTCTTCACGTTCTACTGGATATACGTGCTCAACCTTGGA
ATCGGCCTCATGAACCTCTTCCCACTCGTTCCATTGGACGGCGGCAGGATGCTCGATGATGTAGTCAAGACGTATCTGCC
GGAAAATGTGGCCAAGCCCGTAAGGTACTTCACGATAGGAGTCGGATTGTTCCTCCTAGCGCTGAACCTGTGGCCGGCCT
TAAGGGGTATTATGGGCTAA

Upstream 100 bases:

>100_bases
CGATGTGAGAACAAAGATATACATCCTGAAGTTCCTGGGCAGACTGTGAGTGCGATTACTTTTTAAACTCAGCTCGAAAA
CGCTTTATTAGGTGACTCAA

Downstream 100 bases:

>100_bases
GATATCCTTATTTTACCTCCTTTTATCCGGAATTTATAAGCTCCCGGCTCAAAGTCAGGTAGTGGAGATTTTCTTATGAT
CATCTCTTCGTATTTCAGGT

Product: membrane-associated metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRWKRFWRVYGDIGIALGFLGMA
YVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIALVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVE
PDEEALEKAPLRTRLRVYGAGSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD
MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGHENIIFPLFFTFYWIYVLNLG
IGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIGVGLFLLALNLWPALRGIMG

Sequences:

>Translated_379_residues
MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRWKRFWRVYGDIGIALGFLGMA
YVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIALVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVE
PDEEALEKAPLRTRLRVYGAGSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD
MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGHENIIFPLFFTFYWIYVLNLG
IGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIGVGLFLLALNLWPALRGIMG
>Mature_379_residues
MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRWKRFWRVYGDIGIALGFLGMA
YVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIALVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVE
PDEEALEKAPLRTRLRVYGAGSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD
MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGHENIIFPLFFTFYWIYVLNLG
IGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIGVGLFLLALNLWPALRGIMG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.solfataricus C04034 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR001193
- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 41654; Mature: 41654

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRW
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRFWRVYGDIGIALGFLGMAYVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEHHHHHHHHH
LVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVEPDEEALEKAPLRTRLRVYGA
HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHEEECC
GSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCEEEEECCHHHHH
MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGH
HHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCC
ENIIFPLFFTFYWIYVLNLGIGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
VGLFLLALNLWPALRGIMG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRW
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRFWRVYGDIGIALGFLGMAYVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEHHHHHHHHH
LVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVEPDEEALEKAPLRTRLRVYGA
HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHEEECC
GSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCEEEEECCHHHHH
MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGH
HHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCC
ENIIFPLFFTFYWIYVLNLGIGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
VGLFLLALNLWPALRGIMG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]