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The map label for this gene is lrp [C]

Identifier: 212224766

GI number: 212224766

Start: 1476423

End: 1476875

Strand: Reverse

Name: lrp [C]

Synonym: TON_1615

Alternate gene names: 212224766

Gene position: 1476875-1476423 (Counterclockwise)

Preceding gene: 212224767

Following gene: 212224763

Centisome position: 79.93

GC content: 52.98

Gene sequence:

>453_bases
ATGGTAACTTCACTCGATGCCACTGATATGAAGCTGTTGAAGGAACTTAAGGAAAACGCCAGGGAGAACATAGCCTCGCT
CAGTAAGAAGCTGGGCATCCCGAGGACCACCGTCCACTACCGCATCAAAAAGCTCGTTGAGGAGGGCGTGATCGAGAAGT
TCACTGTTAAGCCAAACTACAAGAAGCTCAACCTTGGCACTACCGCTTTCATACTTGCCAGATACGAGCCAGATTCCGGC
CTGAGCCAGCGGGAGGTCGCTGAAAGAATAGCCGCCCTCGAAGGGGTTTACGAGGTCCACATCATAGCAGGCGAGTGGGA
TCTCCTCATAAAGGTGCGCGCCCCCTCATCGGAGGAGGTTGGCAAGATAGTCGTTGATAGGCTCAGAGAAATCAAGGGCG
TCGGCCAGACTGTAACTATGGTGTCATTCGTCACCGTGAAGGAGGAGCTGTAA

Upstream 100 bases:

>100_bases
GCTCTTAAAGCTTTTTCAGAGTGGCTAAAGGAAAACCTTAAATAAGCTCATCCTCCCAAAAATTATGATTGCAGTTGTAC
AAGTGACGAAGGGGGTCGCG

Downstream 100 bases:

>100_bases
AGCTTTGGGGCGATGATTGGCGTTCTCCTTTCTGATTTTATGATGATGCGAGGTTTACTGAGCCCACTACCGTGGCGCCC
TACATAACGCAGCACTCGTA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVTSLDATDMKLLKELKENARENIASLSKKLGIPRTTVHYRIKKLVEEGVIEKFTVKPNYKKLNLGTTAFILARYEPDSG
LSQREVAERIAALEGVYEVHIIAGEWDLLIKVRAPSSEEVGKIVVDRLREIKGVGQTVTMVSFVTVKEEL

Sequences:

>Translated_150_residues
MVTSLDATDMKLLKELKENARENIASLSKKLGIPRTTVHYRIKKLVEEGVIEKFTVKPNYKKLNLGTTAFILARYEPDSG
LSQREVAERIAALEGVYEVHIIAGEWDLLIKVRAPSSEEVGKIVVDRLREIKGVGQTVTMVSFVTVKEEL
>Mature_150_residues
MVTSLDATDMKLLKELKENARENIASLSKKLGIPRTTVHYRIKKLVEEGVIEKFTVKPNYKKLNLGTTAFILARYEPDSG
LSQREVAERIAALEGVYEVHIIAGEWDLLIKVRAPSSEEVGKIVVDRLREIKGVGQTVTMVSFVTVKEEL

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=30.4054054054054, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR002197
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 16839; Mature: 16839

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00014 ER_TARGET ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTSLDATDMKLLKELKENARENIASLSKKLGIPRTTVHYRIKKLVEEGVIEKFTVKPNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEEECCCCC
KKLNLGTTAFILARYEPDSGLSQREVAERIAALEGVYEVHIIAGEWDLLIKVRAPSSEEV
EEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEECCCCHHH
GKIVVDRLREIKGVGQTVTMVSFVTVKEEL
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTSLDATDMKLLKELKENARENIASLSKKLGIPRTTVHYRIKKLVEEGVIEKFTVKPNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEEECCCCC
KKLNLGTTAFILARYEPDSGLSQREVAERIAALEGVYEVHIIAGEWDLLIKVRAPSSEEV
EEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEECCCCHHH
GKIVVDRLREIKGVGQTVTMVSFVTVKEEL
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA