| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224702
Identifier: 212224702
GI number: 212224702
Start: 1423567
End: 1424241
Strand: Reverse
Name: 212224702
Synonym: TON_1551
Alternate gene names: NA
Gene position: 1424241-1423567 (Counterclockwise)
Preceding gene: 212224703
Following gene: 212224701
Centisome position: 77.09
GC content: 53.48
Gene sequence:
>675_bases ATGCAGGTGTGGACCAAACTCTTCGCGAAGAGCCCGTTCAAGCCTCTAATTAAGCACGCTGATGTGGTTCTCCAGACGGT TGAGACCCTCGAGAAGGCCCTTCGCCTCTGGTACGAGGGGAACTTCGAGGAGATGGAGAGGGTGGCCATCGAGGTCGACC GCCTCGAGGACGTCGCCGACAGGATAAAGGAGGAAATAAGGGACTCCCTCAGCTCCAAGCTTCTCATGGCCGTCGCGAGG GAGGATGTTCTCGTATACCTCCACATGCAGGACAAGGTTGCCGACGCTGCTGAAGACACCGCCAAGTGGCTCCTCATCAA GAGACCGAATGAAATCCCGGCCGATATTAAGGATATAATCCTCCAGATGGGGACGGAGAGCATCAAAGCTGCTAAGCTTG TCCATGAGGCTATAGTCCAGATGGATCGCGTCATAGAGAGCGGCTTCACCGAGAAGGAAATCGAGAGGGAGTACGAGATA ATCAGGGAGATAGAGAGCGTCGAGAGTAAGATAGACGGACTCGATACGAGGCTCATGCAGCTCGTCTTCGAGAAGGAGAA CGAGCTGAGCTGGGGCGACGGTTTCTACATCCTCAACATAGCAAGAACTCTCAGCAATATATCCGACAAGGCCAAGGATT CGGCGGAAAGAATAAGGCTCATGATGAACAAGTGA
Upstream 100 bases:
>100_bases ATCGTGAGGGATATAATAATCTCCTGGTTCGTGACGGTTCCGATAGCGGCCGTTGTGAGCGCCATTATATTCAAGGTGCT TATGGTGGTGGGGTGATATC
Downstream 100 bases:
>100_bases GCTGTTATTTTTTCTTTTTGTTTTGATTGGTTCTCATACTGTTTGTAAGCGGGTAAAAATTTATATAGCTAGTGGTCATT TTTGTGACGGGATTTGTTAA
Product: phosphate transport system regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MQVWTKLFAKSPFKPLIKHADVVLQTVETLEKALRLWYEGNFEEMERVAIEVDRLEDVADRIKEEIRDSLSSKLLMAVAR EDVLVYLHMQDKVADAAEDTAKWLLIKRPNEIPADIKDIILQMGTESIKAAKLVHEAIVQMDRVIESGFTEKEIEREYEI IREIESVESKIDGLDTRLMQLVFEKENELSWGDGFYILNIARTLSNISDKAKDSAERIRLMMNK
Sequences:
>Translated_224_residues MQVWTKLFAKSPFKPLIKHADVVLQTVETLEKALRLWYEGNFEEMERVAIEVDRLEDVADRIKEEIRDSLSSKLLMAVAR EDVLVYLHMQDKVADAAEDTAKWLLIKRPNEIPADIKDIILQMGTESIKAAKLVHEAIVQMDRVIESGFTEKEIEREYEI IREIESVESKIDGLDTRLMQLVFEKENELSWGDGFYILNIARTLSNISDKAKDSAERIRLMMNK >Mature_224_residues MQVWTKLFAKSPFKPLIKHADVVLQTVETLEKALRLWYEGNFEEMERVAIEVDRLEDVADRIKEEIRDSLSSKLLMAVAR EDVLVYLHMQDKVADAAEDTAKWLLIKRPNEIPADIKDIILQMGTESIKAAKLVHEAIVQMDRVIESGFTEKEIEREYEI IREIESVESKIDGLDTRLMQLVFEKENELSWGDGFYILNIARTLSNISDKAKDSAERIRLMMNK
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25967; Mature: 25967
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVWTKLFAKSPFKPLIKHADVVLQTVETLEKALRLWYEGNFEEMERVAIEVDRLEDVAD CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RIKEEIRDSLSSKLLMAVAREDVLVYLHMQDKVADAAEDTAKWLLIKRPNEIPADIKDII HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHEEEEECCCCCCHHHHHHH LQMGTESIKAAKLVHEAIVQMDRVIESGFTEKEIEREYEIIREIESVESKIDGLDTRLMQ HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFEKENELSWGDGFYILNIARTLSNISDKAKDSAERIRLMMNK HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQVWTKLFAKSPFKPLIKHADVVLQTVETLEKALRLWYEGNFEEMERVAIEVDRLEDVAD CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RIKEEIRDSLSSKLLMAVAREDVLVYLHMQDKVADAAEDTAKWLLIKRPNEIPADIKDII HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHEEEEECCCCCCHHHHHHH LQMGTESIKAAKLVHEAIVQMDRVIESGFTEKEIEREYEIIREIESVESKIDGLDTRLMQ HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFEKENELSWGDGFYILNIARTLSNISDKAKDSAERIRLMMNK HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]