| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224667
Identifier: 212224667
GI number: 212224667
Start: 1391869
End: 1392771
Strand: Reverse
Name: 212224667
Synonym: TON_1516
Alternate gene names: NA
Gene position: 1392771-1391869 (Counterclockwise)
Preceding gene: 212224668
Following gene: 212224666
Centisome position: 75.38
GC content: 56.48
Gene sequence:
>903_bases ATGCTGATTAGAGCTTTCGTTCCCGCCCACATCACAGCCTTTTTCGTCCCGCGCTTTCACGATGATCCGCTCAAAGCAGG CTCTCTGGGGGCCGGTGTGAACCTCTCCAAGGGCACGAACGTCTTTCTCAGTGTTGAAACCGGAACGCTGGAGAGGCACA TTCACGTGGCCTTCAACGGCGAGCCTGTGAAGAAGGACGAGGCCGTGATAAGCCACTCCGTCGCTGAAGAGCTCGTTCCA ATGGATTTCACAGGTGAGGTTGAGATATGGCAGTACTTCGACTTTCCCAACGGCTACGGCTTTGGCAACAGTGCCGGCGG GGCCCTGGGCACGGCTCTGGCTCTGAGCTACTCCTTCGGTGGGACGTGGCTCAGGGCTGCGCAGACGGCGCACAGACACG AGGTGATCAACAAGGGTGGCCTGGGTGATGTCATTGCACAGCTCGCCGGTGGGATAGAGATTCGGGTTAAGGCAGGAGGT CCGGGAATAGGTCTGGTCGATAACCTGTTCTTCGAGGACTATAAGGTTCTCGTTGTTCCACTCGGGAGGCTCTCTACCAA GGAGGTTCTCGACGGAGACGTCATCAAAGCCATAGAAGCCGAGGGTTCTAAGGCCCTGGAGAAGCTTCTGGCAGAGCCTA AACCCGAGCGCATGATGATCCTCGCGAGGGAGTTCGCCGAAAGGACCGGTTTGCTGGACGGCGAGCTCCTTGAACTAGCC AGAGAGCTGGACAAAGTGATCTCAAACCCAAGCTCGATGATAATGCTTGGTAGGGGTCTCTTTGCCCTCCTTAAACCGGA AGAAGTTGAAAAAGCTCGGGATATCCTCGCTGACCTGGAAGTTCCGTTCGACGTCGTCGATGTTTTCATGGGCAAGCCCG AGGTTGGCAGGTGGGTAGGATAG
Upstream 100 bases:
>100_bases GTGCCCATCTACGTTGCCGAGGAGTGATTTCCTCTTTTTCCATCCTTTCCTTCACCAATTTTAAAAACATGAGAGAGCAC TCTTCTTGGAGGTGATGGTG
Downstream 100 bases:
>100_bases TCTTTTATCCCCTTACTTCCTATTCTTCTTGGTGGTGAGCATGGGAGACATGAAATACACTGAACTCTCTGACCTTTACC GCAGGCTCGAGAAGACTACC
Product: GHMP kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MLIRAFVPAHITAFFVPRFHDDPLKAGSLGAGVNLSKGTNVFLSVETGTLERHIHVAFNGEPVKKDEAVISHSVAEELVP MDFTGEVEIWQYFDFPNGYGFGNSAGGALGTALALSYSFGGTWLRAAQTAHRHEVINKGGLGDVIAQLAGGIEIRVKAGG PGIGLVDNLFFEDYKVLVVPLGRLSTKEVLDGDVIKAIEAEGSKALEKLLAEPKPERMMILAREFAERTGLLDGELLELA RELDKVISNPSSMIMLGRGLFALLKPEEVEKARDILADLEVPFDVVDVFMGKPEVGRWVG
Sequences:
>Translated_300_residues MLIRAFVPAHITAFFVPRFHDDPLKAGSLGAGVNLSKGTNVFLSVETGTLERHIHVAFNGEPVKKDEAVISHSVAEELVP MDFTGEVEIWQYFDFPNGYGFGNSAGGALGTALALSYSFGGTWLRAAQTAHRHEVINKGGLGDVIAQLAGGIEIRVKAGG PGIGLVDNLFFEDYKVLVVPLGRLSTKEVLDGDVIKAIEAEGSKALEKLLAEPKPERMMILAREFAERTGLLDGELLELA RELDKVISNPSSMIMLGRGLFALLKPEEVEKARDILADLEVPFDVVDVFMGKPEVGRWVG >Mature_300_residues MLIRAFVPAHITAFFVPRFHDDPLKAGSLGAGVNLSKGTNVFLSVETGTLERHIHVAFNGEPVKKDEAVISHSVAEELVP MDFTGEVEIWQYFDFPNGYGFGNSAGGALGTALALSYSFGGTWLRAAQTAHRHEVINKGGLGDVIAQLAGGIEIRVKAGG PGIGLVDNLFFEDYKVLVVPLGRLSTKEVLDGDVIKAIEAEGSKALEKLLAEPKPERMMILAREFAERTGLLDGELLELA RELDKVISNPSSMIMLGRGLFALLKPEEVEKARDILADLEVPFDVVDVFMGKPEVGRWVG
Specific function: Unknown
COG id: COG1829
COG function: function code R; Predicted archaeal kinase (sugar kinase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012043 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 32452; Mature: 32452
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRAFVPAHITAFFVPRFHDDPLKAGSLGAGVNLSKGTNVFLSVETGTLERHIHVAFNG CEEEEHHHHHEEEEECCCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCEEEEEEEEECC EPVKKDEAVISHSVAEELVPMDFTGEVEIWQYFDFPNGYGFGNSAGGALGTALALSYSFG CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHEEECCC GTWLRAAQTAHRHEVINKGGLGDVIAQLAGGIEIRVKAGGPGIGLVDNLFFEDYKVLVVP CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCEEEEEEE LGRLSTKEVLDGDVIKAIEAEGSKALEKLLAEPKPERMMILAREFAERTGLLDGELLELA CCCCCHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH RELDKVISNPSSMIMLGRGLFALLKPEEVEKARDILADLEVPFDVVDVFMGKPEVGRWVG HHHHHHHCCCCCEEEECCCHHEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLIRAFVPAHITAFFVPRFHDDPLKAGSLGAGVNLSKGTNVFLSVETGTLERHIHVAFNG CEEEEHHHHHEEEEECCCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCEEEEEEEEECC EPVKKDEAVISHSVAEELVPMDFTGEVEIWQYFDFPNGYGFGNSAGGALGTALALSYSFG CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHEEECCC GTWLRAAQTAHRHEVINKGGLGDVIAQLAGGIEIRVKAGGPGIGLVDNLFFEDYKVLVVP CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCEEEEEEE LGRLSTKEVLDGDVIKAIEAEGSKALEKLLAEPKPERMMILAREFAERTGLLDGELLELA CCCCCHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH RELDKVISNPSSMIMLGRGLFALLKPEEVEKARDILADLEVPFDVVDVFMGKPEVGRWVG HHHHHHHCCCCCEEEECCCHHEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]