| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224668
Identifier: 212224668
GI number: 212224668
Start: 1392845
End: 1394503
Strand: Reverse
Name: 212224668
Synonym: TON_1517
Alternate gene names: NA
Gene position: 1394503-1392845 (Counterclockwise)
Preceding gene: 212224669
Following gene: 212224667
Centisome position: 75.48
GC content: 56.18
Gene sequence:
>1659_bases GTGTCGGACTTTGGTGTGTTGGCATTGCTGCCCCCATTGGTTGCCATTATCTTAGCCATCTGGACAAAGAGGGTCATCCT GGCGCTGTTTGCGGGCGTCTGGATTGGTGGAGTGATGGTCGCCGGCGGTAATCCGGTAGTCGGGACCACCCAGACGCTGG AGTGGATTGTCAGTAGCGTTACAAGCGACTGGAACGCCAGGATACTCATATTTAACTTCCTGATAGGTGCGGGTGTCGGA CTTATCTACAAGTCCGGCGCAGTCCACGCGCTGGCGGCTTCCCTGGTAAGGAGGGTCAAAAGCAGCAGAGGGGCCTCGAT CCTCGGATGGATCCTCGGTATACTGGTGTTCTTCGATGACTACACCAACACCATAGTCGTCGGAAACACCATGAGGCCCA TCACCGACAGGATGAGGGTTTCCAGGGAGATGCTCGCTTACATAGACGACTCTACCGCGGCACCCGTGGCTGGTCTTGCG CTCGTCTCAACGTGGATAGGCTATGAACTTCTCATGATAGGCAAGGGCTTTGATAACGCCAACATCGTTTATGGAACTTA TGACGCCTGGCTGTCTAGCGTGCCCTATAGGTTCTATTCGATACTGGCAATAATACTCGTTTTCATCGTTGCATACACCC ACAGGCACTACGGCCCCATGCTGAAGGCAGAATATCGCGCTAGGACTGAGGGCAAAGTCCTCCGCGACGGTGCGAAGCCC CTCATGACCACCGAGGTTGACCTAGGCACGCCCAATGAGGGCGGAAGTCTCTGGGACTTCGTTATTCCGCTCCTTGTCCT CGTTGGCGTCTCCATGCTTGGCCTCTGGTACACCGGAGCGGCCAACCTTGAGGCATATAGTCAGGATCTCGGCTGGTGGA CCGAGTTGGAGAACCCGTTCGGTGTCAACTTCCTCAACTACAGCTTCATTGAGTCCTTCCGTGAGGCCGACGCTGCCACC GCGCTTCTCTGGGGCTCCTTCGCAATGGTCGTCGTTGCCAGCATAATGCTTTTGGGCAGGAGGAAAATGACGGTGGAGGA GTGGGAAGACACAGTAGTCAGGGGAATGAAGCAGATGCTCTTCGCCAACACCATCCTCGTCCTTGCTTGGAGCCTCGGAA CCGCCGCTGAAAGCGTTGGAACCGGCGACTACGTCATCAGCCTTGCGACCAGCTCTGGGGCGAACCTCGGACCATGGATG CCGCTGATAATGTTCCTCTCTGCGATGTTCGTTGCGTTTACCACGGGAACTAGCTGGGGAACTTTCGCCATAATGGTTCC GCTTGGAGTCCAGCTCAGCCTGGCCTTCACCAACGGTCAGGTTAATGAGATAGTCTTCGCCACCATCGGAGCCACGTTTA CCGGAAGCATCTTCGGCGACCACTGCTCACCCATCAGTGATACCACCATCATGAGCTCCATGTTCAGTGGTTCTGACCAC ATAGACCACGTCACAACCCAAATACCCTATGCCTTCACGGTTGCGACAATTGGCAGCGTGCTGTACCTCCTGTTCGCCCT GGGAGTCACGAGCTGGGTTATACTCCTGCCGCTGGGTATAGCCCTCCTCGTCGGTGCGTGGTACGTCCTCAGCGAGTGGT ACGGCAAGAAGTACGGCATACCGCACGGCAAGGTGCCCATCTACGTTGCCGAGGAGTGA
Upstream 100 bases:
>100_bases AGAAAATTTTTCGAGAATAAGGCAATACGACAAAGGATATACAGAAAGCTTTATATTCTCTCCGTGTTCCTTTGCATGAA ACACCTCAGGAGGTGAAAAT
Downstream 100 bases:
>100_bases TTTCCTCTTTTTCCATCCTTTCCTTCACCAATTTTAAAAACATGAGAGAGCACTCTTCTTGGAGGTGATGGTGATGCTGA TTAGAGCTTTCGTTCCCGCC
Product: NhaC-type sodium/hydrogen antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSDFGVLALLPPLVAIILAIWTKRVILALFAGVWIGGVMVAGGNPVVGTTQTLEWIVSSVTSDWNARILIFNFLIGAGVG LIYKSGAVHALAASLVRRVKSSRGASILGWILGILVFFDDYTNTIVVGNTMRPITDRMRVSREMLAYIDDSTAAPVAGLA LVSTWIGYELLMIGKGFDNANIVYGTYDAWLSSVPYRFYSILAIILVFIVAYTHRHYGPMLKAEYRARTEGKVLRDGAKP LMTTEVDLGTPNEGGSLWDFVIPLLVLVGVSMLGLWYTGAANLEAYSQDLGWWTELENPFGVNFLNYSFIESFREADAAT ALLWGSFAMVVVASIMLLGRRKMTVEEWEDTVVRGMKQMLFANTILVLAWSLGTAAESVGTGDYVISLATSSGANLGPWM PLIMFLSAMFVAFTTGTSWGTFAIMVPLGVQLSLAFTNGQVNEIVFATIGATFTGSIFGDHCSPISDTTIMSSMFSGSDH IDHVTTQIPYAFTVATIGSVLYLLFALGVTSWVILLPLGIALLVGAWYVLSEWYGKKYGIPHGKVPIYVAEE
Sequences:
>Translated_552_residues MSDFGVLALLPPLVAIILAIWTKRVILALFAGVWIGGVMVAGGNPVVGTTQTLEWIVSSVTSDWNARILIFNFLIGAGVG LIYKSGAVHALAASLVRRVKSSRGASILGWILGILVFFDDYTNTIVVGNTMRPITDRMRVSREMLAYIDDSTAAPVAGLA LVSTWIGYELLMIGKGFDNANIVYGTYDAWLSSVPYRFYSILAIILVFIVAYTHRHYGPMLKAEYRARTEGKVLRDGAKP LMTTEVDLGTPNEGGSLWDFVIPLLVLVGVSMLGLWYTGAANLEAYSQDLGWWTELENPFGVNFLNYSFIESFREADAAT ALLWGSFAMVVVASIMLLGRRKMTVEEWEDTVVRGMKQMLFANTILVLAWSLGTAAESVGTGDYVISLATSSGANLGPWM PLIMFLSAMFVAFTTGTSWGTFAIMVPLGVQLSLAFTNGQVNEIVFATIGATFTGSIFGDHCSPISDTTIMSSMFSGSDH IDHVTTQIPYAFTVATIGSVLYLLFALGVTSWVILLPLGIALLVGAWYVLSEWYGKKYGIPHGKVPIYVAEE >Mature_551_residues SDFGVLALLPPLVAIILAIWTKRVILALFAGVWIGGVMVAGGNPVVGTTQTLEWIVSSVTSDWNARILIFNFLIGAGVGL IYKSGAVHALAASLVRRVKSSRGASILGWILGILVFFDDYTNTIVVGNTMRPITDRMRVSREMLAYIDDSTAAPVAGLAL VSTWIGYELLMIGKGFDNANIVYGTYDAWLSSVPYRFYSILAIILVFIVAYTHRHYGPMLKAEYRARTEGKVLRDGAKPL MTTEVDLGTPNEGGSLWDFVIPLLVLVGVSMLGLWYTGAANLEAYSQDLGWWTELENPFGVNFLNYSFIESFREADAATA LLWGSFAMVVVASIMLLGRRKMTVEEWEDTVVRGMKQMLFANTILVLAWSLGTAAESVGTGDYVISLATSSGANLGPWMP LIMFLSAMFVAFTTGTSWGTFAIMVPLGVQLSLAFTNGQVNEIVFATIGATFTGSIFGDHCSPISDTTIMSSMFSGSDHI DHVTTQIPYAFTVATIGSVLYLLFALGVTSWVILLPLGIALLVGAWYVLSEWYGKKYGIPHGKVPIYVAEE
Specific function: Unknown
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018461 [H]
Pfam domain/function: PF03553 Na_H_antiporter [H]
EC number: NA
Molecular weight: Translated: 59958; Mature: 59826
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFGVLALLPPLVAIILAIWTKRVILALFAGVWIGGVMVAGGNPVVGTTQTLEWIVSSV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHH TSDWNARILIFNFLIGAGVGLIYKSGAVHALAASLVRRVKSSRGASILGWILGILVFFDD CCCCCCEEHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC YTNTIVVGNTMRPITDRMRVSREMLAYIDDSTAAPVAGLALVSTWIGYELLMIGKGFDNA CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCC NIVYGTYDAWLSSVPYRFYSILAIILVFIVAYTHRHYGPMLKAEYRARTEGKVLRDGAKP CEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHCCCCC LMTTEVDLGTPNEGGSLWDFVIPLLVLVGVSMLGLWYTGAANLEAYSQDLGWWTELENPF CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCCC GVNFLNYSFIESFREADAATALLWGSFAMVVVASIMLLGRRKMTVEEWEDTVVRGMKQML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FANTILVLAWSLGTAAESVGTGDYVISLATSSGANLGPWMPLIMFLSAMFVAFTTGTSWG HHHHHHHHHHHHCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC TFAIMVPLGVQLSLAFTNGQVNEIVFATIGATFTGSIFGDHCSPISDTTIMSSMFSGSDH EEEEEEECCCEEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHCCCCC IDHVTTQIPYAFTVATIGSVLYLLFALGVTSWVILLPLGIALLVGAWYVLSEWYGKKYGI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PHGKVPIYVAEE CCCCCCEEEECC >Mature Secondary Structure SDFGVLALLPPLVAIILAIWTKRVILALFAGVWIGGVMVAGGNPVVGTTQTLEWIVSSV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHH TSDWNARILIFNFLIGAGVGLIYKSGAVHALAASLVRRVKSSRGASILGWILGILVFFDD CCCCCCEEHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC YTNTIVVGNTMRPITDRMRVSREMLAYIDDSTAAPVAGLALVSTWIGYELLMIGKGFDNA CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCC NIVYGTYDAWLSSVPYRFYSILAIILVFIVAYTHRHYGPMLKAEYRARTEGKVLRDGAKP CEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHCCCCC LMTTEVDLGTPNEGGSLWDFVIPLLVLVGVSMLGLWYTGAANLEAYSQDLGWWTELENPF CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCCC GVNFLNYSFIESFREADAATALLWGSFAMVVVASIMLLGRRKMTVEEWEDTVVRGMKQML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FANTILVLAWSLGTAAESVGTGDYVISLATSSGANLGPWMPLIMFLSAMFVAFTTGTSWG HHHHHHHHHHHHCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC TFAIMVPLGVQLSLAFTNGQVNEIVFATIGATFTGSIFGDHCSPISDTTIMSSMFSGSDH EEEEEEECCCEEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHCCCCC IDHVTTQIPYAFTVATIGSVLYLLFALGVTSWVILLPLGIALLVGAWYVLSEWYGKKYGI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PHGKVPIYVAEE CCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]