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The map label for this gene is ycdN [C]

Identifier: 212223995

GI number: 212223995

Start: 783178

End: 784035

Strand: Reverse

Name: ycdN [C]

Synonym: TON_0846

Alternate gene names: 212223995

Gene position: 784035-783178 (Counterclockwise)

Preceding gene: 212223996

Following gene: 212223994

Centisome position: 42.44

GC content: 51.28

Gene sequence:

>858_bases
ATGAACGCTGGCGCTTTCCTCATAACCTTCAGAGAGGCCCTCGAGGCCGCCATAATAGTCGCAATAATAGTTGCCTATTT
AAGGAGAACCAACCGGACTGAACAGATAAAAAACGTCTGGATCGGCGTGGGACTTTCCCTGCTGGCTAGTATTATCCTCG
GAGCCGCGATACTGGGGCTCTATGGGGGCCTAGAAGAGAAGGAGCTTTTTGAGGGCCTGGCTTCCTACCTGGCTGTGATA
GTCCTCACGAGCATGATATACTGGATGGCTACCAAGGGGAAGAACATCCGGACCGAGATAGAGAGCAAGGTGAGCACCGC
GATATCTCCCTTGGCATTAATCGGCTTTACGTTCATAGTTGTCTTCAGGGAGGGACTTGAGACTGTCCTGTTCCTCACGC
CCTTCATGACTCAAGACTTCGGCGGCACGCTCCTTGGCCTTATAACTGGCTTAGTCAGTGCATTTATACTTGCATACCTC
ATCTACGGAGTGGGCATGAAGATAAACCTGAGGACATTTTTCTACTACAGCTCGATACTCCTTGTCTTCGTCGCTGCTGG
CATGGCAGGTTACGGGACCCATGAGCTCATAGAGTGGGCTGAGGAGGAAGGAATGGATTTGGGATTTATAGGTGAAACCG
CGTACGACCTCGGCATTCCAAGCGACAGCGTGTGGCACCACAAGGGAGCAATAGGTTCCCTCTTTGCAGTGCTCTTTGGA
TACTCGACGAGCATGGAGTGGGGAAGGATAATAGTGCAGTTTGGTTACCTCCTCCTAGCCCTGTACCTTGTGCTCAGGGC
CTACAGGAAGGAGCCTTTGTTGAATCCTGAAGATGCAGGACTCAAAAGTAGCGTTTAG

Upstream 100 bases:

>100_bases
CGTTTTCATCCCTACGTCCGAAACTTCAATTTGGCAAAGATAAACTTCATAAGTTATCCGAGAGATTTTAGACTGGCCTA
AAAATTTTGGGGGTGGAGTA

Downstream 100 bases:

>100_bases
CTTTTTTACCCATTTTTGTCCAGCAATGCATAAAAAGCATGAATCTGAGTTCAAGTCAGGTGAAGAAAATGGGCGTGCGG
AGTTTTAAGCGGATCGCCCT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNAGAFLITFREALEAAIIVAIIVAYLRRTNRTEQIKNVWIGVGLSLLASIILGAAILGLYGGLEEKELFEGLASYLAVI
VLTSMIYWMATKGKNIRTEIESKVSTAISPLALIGFTFIVVFREGLETVLFLTPFMTQDFGGTLLGLITGLVSAFILAYL
IYGVGMKINLRTFFYYSSILLVFVAAGMAGYGTHELIEWAEEEGMDLGFIGETAYDLGIPSDSVWHHKGAIGSLFAVLFG
YSTSMEWGRIIVQFGYLLLALYLVLRAYRKEPLLNPEDAGLKSSV

Sequences:

>Translated_285_residues
MNAGAFLITFREALEAAIIVAIIVAYLRRTNRTEQIKNVWIGVGLSLLASIILGAAILGLYGGLEEKELFEGLASYLAVI
VLTSMIYWMATKGKNIRTEIESKVSTAISPLALIGFTFIVVFREGLETVLFLTPFMTQDFGGTLLGLITGLVSAFILAYL
IYGVGMKINLRTFFYYSSILLVFVAAGMAGYGTHELIEWAEEEGMDLGFIGETAYDLGIPSDSVWHHKGAIGSLFAVLFG
YSTSMEWGRIIVQFGYLLLALYLVLRAYRKEPLLNPEDAGLKSSV
>Mature_285_residues
MNAGAFLITFREALEAAIIVAIIVAYLRRTNRTEQIKNVWIGVGLSLLASIILGAAILGLYGGLEEKELFEGLASYLAVI
VLTSMIYWMATKGKNIRTEIESKVSTAISPLALIGFTFIVVFREGLETVLFLTPFMTQDFGGTLLGLITGLVSAFILAYL
IYGVGMKINLRTFFYYSSILLVFVAAGMAGYGTHELIEWAEEEGMDLGFIGETAYDLGIPSDSVWHHKGAIGSLFAVLFG
YSTSMEWGRIIVQFGYLLLALYLVLRAYRKEPLLNPEDAGLKSSV

Specific function: Unknown

COG id: COG0672

COG function: function code P; High-affinity Fe2+/Pb2+ permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005217
- InterPro:   IPR004923 [H]

Pfam domain/function: PF03239 FTR1 [H]

EC number: NA

Molecular weight: Translated: 31259; Mature: 31259

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGAFLITFREALEAAIIVAIIVAYLRRTNRTEQIKNVWIGVGLSLLASIILGAAILGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGGLEEKELFEGLASYLAVIVLTSMIYWMATKGKNIRTEIESKVSTAISPLALIGFTFIV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VFREGLETVLFLTPFMTQDFGGTLLGLITGLVSAFILAYLIYGVGMKINLRTFFYYSSIL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LVFVAAGMAGYGTHELIEWAEEEGMDLGFIGETAYDLGIPSDSVWHHKGAIGSLFAVLFG
HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCHHHCCHHHHHHHHHHH
YSTSMEWGRIIVQFGYLLLALYLVLRAYRKEPLLNPEDAGLKSSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAGAFLITFREALEAAIIVAIIVAYLRRTNRTEQIKNVWIGVGLSLLASIILGAAILGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGGLEEKELFEGLASYLAVIVLTSMIYWMATKGKNIRTEIESKVSTAISPLALIGFTFIV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VFREGLETVLFLTPFMTQDFGGTLLGLITGLVSAFILAYLIYGVGMKINLRTFFYYSSIL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LVFVAAGMAGYGTHELIEWAEEEGMDLGFIGETAYDLGIPSDSVWHHKGAIGSLFAVLFG
HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCHHHCCHHHHHHHHHHH
YSTSMEWGRIIVQFGYLLLALYLVLRAYRKEPLLNPEDAGLKSSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]