| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is yccU [C]
Identifier: 212223994
GI number: 212223994
Start: 782741
End: 783109
Strand: Reverse
Name: yccU [C]
Synonym: TON_0845
Alternate gene names: 212223994
Gene position: 783109-782741 (Counterclockwise)
Preceding gene: 212223995
Following gene: 212223993
Centisome position: 42.39
GC content: 50.14
Gene sequence:
>369_bases ATGGGCGTGCGGAGTTTTAAGCGGATCGCCCTGGTGGGGGCAAGCCCGAATCCAGCCAAATACGGCAACATAATCCTAAG AGATTTAATGAGAAAGGGCTTTGAGGTTCTGCCCGTTAATCCCAACTACGACGAGATTGAAGGATTAAAGTGCTACAGAA GCGTTAGGGAGCTCCCGAAAGATGTGGATGTGATAGTCTTTGTCGTCCCTCCCAAAGTTGGCATTCAGGTGGCAAAGGAA GCCGTTGAAGCCGGTTTCAGAAGGCTGTGGTTCCAGCCAGGAGCTGAGAGCGAAGAGATTAGGGAGTTTTTGGAGAGCCA AGGCGTGGAGTACAGTTTTATAAAGTGCATAATGGTGGAGACAGGGTGA
Upstream 100 bases:
>100_bases CTGAAGATGCAGGACTCAAAAGTAGCGTTTAGCTTTTTTACCCATTTTTGTCCAGCAATGCATAAAAAGCATGAATCTGA GTTCAAGTCAGGTGAAGAAA
Downstream 100 bases:
>100_bases TAGTGATGGAGTTCTACTACGTCAGGAGGTTTGAGGAGGATCTAGATTTCGTATGGGAGCGCTTTAAGGAGAAGCTCGAG GAGGGGGGGTTCCTTCTGAT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGIQVAKE AVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVETG
Sequences:
>Translated_122_residues MGVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGIQVAKE AVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVETG >Mature_121_residues GVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGIQVAKEA VEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVETG
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13777; Mature: 13646
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPK CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCC DVDVIVFVVPPKVGIQVAKEAVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVE CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHEEEEEEE TG CC >Mature Secondary Structure GVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPK CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCC DVDVIVFVVPPKVGIQVAKEAVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVE CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHEEEEEEE TG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA