Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is yccU [C]

Identifier: 212223994

GI number: 212223994

Start: 782741

End: 783109

Strand: Reverse

Name: yccU [C]

Synonym: TON_0845

Alternate gene names: 212223994

Gene position: 783109-782741 (Counterclockwise)

Preceding gene: 212223995

Following gene: 212223993

Centisome position: 42.39

GC content: 50.14

Gene sequence:

>369_bases
ATGGGCGTGCGGAGTTTTAAGCGGATCGCCCTGGTGGGGGCAAGCCCGAATCCAGCCAAATACGGCAACATAATCCTAAG
AGATTTAATGAGAAAGGGCTTTGAGGTTCTGCCCGTTAATCCCAACTACGACGAGATTGAAGGATTAAAGTGCTACAGAA
GCGTTAGGGAGCTCCCGAAAGATGTGGATGTGATAGTCTTTGTCGTCCCTCCCAAAGTTGGCATTCAGGTGGCAAAGGAA
GCCGTTGAAGCCGGTTTCAGAAGGCTGTGGTTCCAGCCAGGAGCTGAGAGCGAAGAGATTAGGGAGTTTTTGGAGAGCCA
AGGCGTGGAGTACAGTTTTATAAAGTGCATAATGGTGGAGACAGGGTGA

Upstream 100 bases:

>100_bases
CTGAAGATGCAGGACTCAAAAGTAGCGTTTAGCTTTTTTACCCATTTTTGTCCAGCAATGCATAAAAAGCATGAATCTGA
GTTCAAGTCAGGTGAAGAAA

Downstream 100 bases:

>100_bases
TAGTGATGGAGTTCTACTACGTCAGGAGGTTTGAGGAGGATCTAGATTTCGTATGGGAGCGCTTTAAGGAGAAGCTCGAG
GAGGGGGGGTTCCTTCTGAT

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MGVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGIQVAKE
AVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVETG

Sequences:

>Translated_122_residues
MGVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGIQVAKE
AVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVETG
>Mature_121_residues
GVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGIQVAKEA
VEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVETG

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13777; Mature: 13646

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPK
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCC
DVDVIVFVVPPKVGIQVAKEAVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHEEEEEEE
TG
CC
>Mature Secondary Structure 
GVRSFKRIALVGASPNPAKYGNIILRDLMRKGFEVLPVNPNYDEIEGLKCYRSVRELPK
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCC
DVDVIVFVVPPKVGIQVAKEAVEAGFRRLWFQPGAESEEIREFLESQGVEYSFIKCIMVE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHEEEEEEE
TG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA