| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223938
Identifier: 212223938
GI number: 212223938
Start: 735703
End: 736755
Strand: Reverse
Name: 212223938
Synonym: TON_0789
Alternate gene names: NA
Gene position: 736755-735703 (Counterclockwise)
Preceding gene: 212223939
Following gene: 212223936
Centisome position: 39.88
GC content: 50.14
Gene sequence:
>1053_bases ATGGTGATGTGGTTCAGGAGGATAGAGATTAGGGAAATTGAAGGGGCCATAAAGGCAATGCCCCACTACTTCGCAGTTCT TAGGGGAGATGAAGTGCCGAACTTCTTTCTATCAAAACGGGTTGGAGTAAAGTTTGACGAAGATGCGCCATTGGAGGAGC TTTGGGAGATTCACGAAGAGGCTATGGACAGATTGAAGGAGAACGACCTCAGCGAAAGCCCAGAGAAGAGTCTCCTCGAC CTCAAAGCGGTTATAGCTGATAAGATCCTCGAGAGCTGCGAGCTCTGCGAGTTCAAGTGCCGAGCGAACAGAAAAAGGGA AATCGGCTACTGCAGGGTGAAGGAGAGCCTCGTTGCAAGCGAGTTCCTCCACTACGGCGAGGAGCCGGAGCTGATTCCTT CTTACACGGTCTTCTTCAGCGGCTGCAACTTCCGGTGCGTCTTCTGCCAGAACTGGGACATCAGTCAGTTTCGGGCCGGA GTTGAATATCCACCAAATGAGATGGCGGAAAAGATAACCGTGGCCTTCGCACAGGGAGCAAAGAACGTGAACTTCGTCGG CGGCGAGCCTACTCCAAACCTTCCCTTCATCATCAAGACCCTCAGGCACGTCAAAGTCCCGATTCCAGTAGTCTGGAACT CTAACATGTACATGAGCGAAGAGGCAATGAAACTTCTCGATGGGGTTGTCGATGTTTACCTCGCCGACTTCAAGTGGGGA AACGACGAATGTGCCCTGAAGTACTCAAAGGTTCCTCGGTATTGGGAGGTTATCACCAGAAACTTCCTCCTCGCTAAAAG GCATTACAAAGCCGAGTTCCTGATACGACATCTAGTTATTCCTGGCCACCTTGACTGCTGCACGAGGCAGATATTAAAGT GGATAGCTGAGAACATCGGAAAAGATGTTAGAATAAACGTGATGTTTCAGTACAGGCCAGAATACGAAGCAGGGAAAAAT CCAGAGATAAGCAGAACCCTCAAGGATGAGGAGATGATTGAAGCCGCACGGCTCGTGAGAGAATTTGGGTTCAAGAACGC ACTGGTGGGCTAA
Upstream 100 bases:
>100_bases GGACGGCCGGATTCCAGGCTACTGCGACGAGTGCCTCCTCAAGCTGAGGGCCGCCTTGTAAAGGTAATCGACAAGTGTTT TAACTATGAGAACCTATTAG
Downstream 100 bases:
>100_bases CCGCCAGCTCTTGCCAGTCTGAGGACATCCATGAACTTCTCTATCTCTTCGTCTGCCCCTTCCAGAAGCACTCTGTACCT CGGCATGCCGTGGAATGGTT
Product: pyruvate formate lyase activating protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEEAMDRLKENDLSESPEKSLLD LKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVASEFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAG VEYPPNEMAEKITVAFAQGAKNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIGKDVRINVMFQYRPEYEAGKN PEISRTLKDEEMIEAARLVREFGFKNALVG
Sequences:
>Translated_350_residues MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEEAMDRLKENDLSESPEKSLLD LKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVASEFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAG VEYPPNEMAEKITVAFAQGAKNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIGKDVRINVMFQYRPEYEAGKN PEISRTLKDEEMIEAARLVREFGFKNALVG >Mature_350_residues MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEEAMDRLKENDLSESPEKSLLD LKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVASEFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAG VEYPPNEMAEKITVAFAQGAKNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIGKDVRINVMFQYRPEYEAGKN PEISRTLKDEEMIEAARLVREFGFKNALVG
Specific function: Unknown
COG id: COG1313
COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016431 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 40727; Mature: 40727
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEE CCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCEECCCCCHHHHHHHHHH AMDRLKENDLSESPEKSLLDLKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVAS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH EFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAGVEYPPNEMAEKITVAFAQGA HHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC KNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG CCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCC NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIG CCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC KDVRINVMFQYRPEYEAGKNPEISRTLKDEEMIEAARLVREFGFKNALVG CCEEEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEE CCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCEECCCCCHHHHHHHHHH AMDRLKENDLSESPEKSLLDLKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVAS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH EFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAGVEYPPNEMAEKITVAFAQGA HHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC KNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG CCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCC NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIG CCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC KDVRINVMFQYRPEYEAGKNPEISRTLKDEEMIEAARLVREFGFKNALVG CCEEEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]