Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223938

Identifier: 212223938

GI number: 212223938

Start: 735703

End: 736755

Strand: Reverse

Name: 212223938

Synonym: TON_0789

Alternate gene names: NA

Gene position: 736755-735703 (Counterclockwise)

Preceding gene: 212223939

Following gene: 212223936

Centisome position: 39.88

GC content: 50.14

Gene sequence:

>1053_bases
ATGGTGATGTGGTTCAGGAGGATAGAGATTAGGGAAATTGAAGGGGCCATAAAGGCAATGCCCCACTACTTCGCAGTTCT
TAGGGGAGATGAAGTGCCGAACTTCTTTCTATCAAAACGGGTTGGAGTAAAGTTTGACGAAGATGCGCCATTGGAGGAGC
TTTGGGAGATTCACGAAGAGGCTATGGACAGATTGAAGGAGAACGACCTCAGCGAAAGCCCAGAGAAGAGTCTCCTCGAC
CTCAAAGCGGTTATAGCTGATAAGATCCTCGAGAGCTGCGAGCTCTGCGAGTTCAAGTGCCGAGCGAACAGAAAAAGGGA
AATCGGCTACTGCAGGGTGAAGGAGAGCCTCGTTGCAAGCGAGTTCCTCCACTACGGCGAGGAGCCGGAGCTGATTCCTT
CTTACACGGTCTTCTTCAGCGGCTGCAACTTCCGGTGCGTCTTCTGCCAGAACTGGGACATCAGTCAGTTTCGGGCCGGA
GTTGAATATCCACCAAATGAGATGGCGGAAAAGATAACCGTGGCCTTCGCACAGGGAGCAAAGAACGTGAACTTCGTCGG
CGGCGAGCCTACTCCAAACCTTCCCTTCATCATCAAGACCCTCAGGCACGTCAAAGTCCCGATTCCAGTAGTCTGGAACT
CTAACATGTACATGAGCGAAGAGGCAATGAAACTTCTCGATGGGGTTGTCGATGTTTACCTCGCCGACTTCAAGTGGGGA
AACGACGAATGTGCCCTGAAGTACTCAAAGGTTCCTCGGTATTGGGAGGTTATCACCAGAAACTTCCTCCTCGCTAAAAG
GCATTACAAAGCCGAGTTCCTGATACGACATCTAGTTATTCCTGGCCACCTTGACTGCTGCACGAGGCAGATATTAAAGT
GGATAGCTGAGAACATCGGAAAAGATGTTAGAATAAACGTGATGTTTCAGTACAGGCCAGAATACGAAGCAGGGAAAAAT
CCAGAGATAAGCAGAACCCTCAAGGATGAGGAGATGATTGAAGCCGCACGGCTCGTGAGAGAATTTGGGTTCAAGAACGC
ACTGGTGGGCTAA

Upstream 100 bases:

>100_bases
GGACGGCCGGATTCCAGGCTACTGCGACGAGTGCCTCCTCAAGCTGAGGGCCGCCTTGTAAAGGTAATCGACAAGTGTTT
TAACTATGAGAACCTATTAG

Downstream 100 bases:

>100_bases
CCGCCAGCTCTTGCCAGTCTGAGGACATCCATGAACTTCTCTATCTCTTCGTCTGCCCCTTCCAGAAGCACTCTGTACCT
CGGCATGCCGTGGAATGGTT

Product: pyruvate formate lyase activating protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEEAMDRLKENDLSESPEKSLLD
LKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVASEFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAG
VEYPPNEMAEKITVAFAQGAKNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG
NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIGKDVRINVMFQYRPEYEAGKN
PEISRTLKDEEMIEAARLVREFGFKNALVG

Sequences:

>Translated_350_residues
MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEEAMDRLKENDLSESPEKSLLD
LKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVASEFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAG
VEYPPNEMAEKITVAFAQGAKNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG
NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIGKDVRINVMFQYRPEYEAGKN
PEISRTLKDEEMIEAARLVREFGFKNALVG
>Mature_350_residues
MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEEAMDRLKENDLSESPEKSLLD
LKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVASEFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAG
VEYPPNEMAEKITVAFAQGAKNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG
NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIGKDVRINVMFQYRPEYEAGKN
PEISRTLKDEEMIEAARLVREFGFKNALVG

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40727; Mature: 40727

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEE
CCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCEECCCCCHHHHHHHHHH
AMDRLKENDLSESPEKSLLDLKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVAS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
EFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAGVEYPPNEMAEKITVAFAQGA
HHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
KNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG
CCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCC
NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIG
CCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
KDVRINVMFQYRPEYEAGKNPEISRTLKDEEMIEAARLVREFGFKNALVG
CCEEEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVMWFRRIEIREIEGAIKAMPHYFAVLRGDEVPNFFLSKRVGVKFDEDAPLEELWEIHEE
CCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCEECCCCCHHHHHHHHHH
AMDRLKENDLSESPEKSLLDLKAVIADKILESCELCEFKCRANRKREIGYCRVKESLVAS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
EFLHYGEEPELIPSYTVFFSGCNFRCVFCQNWDISQFRAGVEYPPNEMAEKITVAFAQGA
HHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
KNVNFVGGEPTPNLPFIIKTLRHVKVPIPVVWNSNMYMSEEAMKLLDGVVDVYLADFKWG
CCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCC
NDECALKYSKVPRYWEVITRNFLLAKRHYKAEFLIRHLVIPGHLDCCTRQILKWIAENIG
CCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
KDVRINVMFQYRPEYEAGKNPEISRTLKDEEMIEAARLVREFGFKNALVG
CCEEEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]