| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223895
Identifier: 212223895
GI number: 212223895
Start: 694826
End: 695470
Strand: Reverse
Name: 212223895
Synonym: TON_0746
Alternate gene names: NA
Gene position: 695470-694826 (Counterclockwise)
Preceding gene: 212223896
Following gene: 212223892
Centisome position: 37.64
GC content: 51.94
Gene sequence:
>645_bases ATGACGAGTCTTAATCAGCGCCAAGAGAACGATGGATTCCTGGAGTTTTACGCGAGCGAGGCCCTAACCTGCCCGAGAAG GATATACTTTCGCCTGAAGGGCTACCCCGAGAAGTGGCCAGAGTTCGTTAGAGTGAGACTGAACCAGGGGATAAACACCC ACAACGTGCTCGGTGAGATTTTAAAGAACCGCTTCGGCTTCGAGCTTGAGAAGCACATGATTCTCCGCTCCTCCAGGCTC GGCTTCGAGATACACGGAAGGGTGGATGCTATAAGGGACTTTCCCATCGAAATCAAAGGCAAGACGAGTCTGCCGAGAGT CCCATACGACTATCACCTTGCCCAGCTCAACATATATCTCCGCTGGGCTGAAGCCGAGTACGGCTATCTCTACTACATTA AGCTCCACGAGGAGCCTATGAAAATTATCCGCAAAATCGACTTTTCCCGCTTCCCCATCGTCAAGGGGCCGAACTTTAGG GCTTTTGAAGTGCCCTACGACGGCAAGCTGTTCCGCGAAACTCTCAAGCACTTCTACAACGTCAAGAGGCATTACGAAAA AGGAAAGCCCCCCAAGGGCTGGAATGACTACGCCTGTAAATTCTGCCCGTATCGCTACCTCTGCTATTCGGACGGTGGAG AGTAG
Upstream 100 bases:
>100_bases CCCTTGCCCAGTCTGATGGGTGATGACGTCGGTATTAGCTGACGCAGGGGCGGCGAGGTTCGCGGGCCAATGACCCGCCC TGTTTCCTGGAGGGACATAA
Downstream 100 bases:
>100_bases TTGAGGGCCACAAAACTCACCCTTTCCTGACCTTCCACTTTAGCCCATTATCCACTGTTGCCTCTATTACACCCTCATTG TAGAGCTTCGCCACAAAGGC
Product: predicted exonuclease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEILKNRFGFELEKHMILRSSRL GFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYLRWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFR AFEVPYDGKLFRETLKHFYNVKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE
Sequences:
>Translated_214_residues MTSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEILKNRFGFELEKHMILRSSRL GFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYLRWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFR AFEVPYDGKLFRETLKHFYNVKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE >Mature_213_residues TSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEILKNRFGFELEKHMILRSSRLG FEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYLRWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFRA FEVPYDGKLFRETLKHFYNVKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE
Specific function: Unknown
COG id: COG1468
COG function: function code L; RecB family exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25699; Mature: 25568
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEI CCCCCCCCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH LKNRFGFELEKHMILRSSRLGFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYL HHHHCCCCHHHHHHHHHCCCCEEEECCEEHHCCCCEEEECCCCCCCCCCCEEEEEEEEEE RWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFRAFEVPYDGKLFRETLKHFYN EEECCCCCEEEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHH VKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE HHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCC >Mature Secondary Structure TSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEI CCCCCCCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH LKNRFGFELEKHMILRSSRLGFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYL HHHHCCCCHHHHHHHHHCCCCEEEECCEEHHCCCCEEEECCCCCCCCCCCEEEEEEEEEE RWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFRAFEVPYDGKLFRETLKHFYN EEECCCCCEEEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHH VKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE HHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA