| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223795
Identifier: 212223795
GI number: 212223795
Start: 603427
End: 604521
Strand: Reverse
Name: 212223795
Synonym: TON_0647
Alternate gene names: NA
Gene position: 604521-603427 (Counterclockwise)
Preceding gene: 212223796
Following gene: 212223791
Centisome position: 32.72
GC content: 52.79
Gene sequence:
>1095_bases ATGGACGAGATGCTTAAACTCGCGAAGGAGTTCTACAAGGACGAGTATGCAGACTCGGTTCTCTACGCCCAGCTGGCAAA GATAGAGAAGGACGACGAAATAAGGAAGGAGTTTCTCAGGCTCTCGAACATAGAATCAAAGCACGCTAAGTTCTGGTATG ATTTCATAACACAGCACGGCGGAGAAGTCCCGAAGCCAAGCGTTAAGAGGCTCACCATCTGGAGCGTCAAGCTGCTCCGG AAGATACTCGGTCCTGGCTCGGTCGCTTCCCTCCTTGAGATGGGCGAGAACAGTGCAATTCAGAAGTACTTCAGGTACCT CACGACTTACGCTGACCGCTTTACTCCCGAAGAGATGGAGCAAATAAAAGAGGTCATTCTCGACGAGCTGGAGCACGAGA AGTTCTTCTATGAGAGCAAGCAGCGCTTCCACGTCGAAAACACGCGCGACTTAGTTCTTGGCATGAACGATGGTCTCGTT GAGATCCTTGGTGCTGTAACAGGTCTCTCCGCGGTCTACCCCAACAATCCCCAGCTCGTCGGAATAAGTGGTCTCATCGT CGGCGTTGCTGGGGCACTCTCGATGGCGATAGGAACCTTTGTCTCGGTCCGTTCCCAGAGGCAGATTAAGGAGGCAATTC GGGACAGGATGGAGGTTCTCTTCCGGGTTTCTCCTGAGAAGGCCATGGAAGAGCTCATTGATAAACTCACCGAAGGCGGC ATGCCCGAGGAAGTTGCCAAAGAAGTTGCCAAGGAACTCGCTAACAACAGCGAAGCCATCATGAAGCTTCTCATTCCAGA GGCAGAGGAAAACGAGATAAGGGCGGCGCTCTACACTGGAATATCCTATCTGTTAGGCGTTGCATTCCCGGTCACGCCGT ACTTCCTCGCTTCAAGCTCCCTAACGGCTCTGCCGTTCTCAATACTCTTGGCCGGTTCTGCCCTGGCGATAGTGGCAACC ATCATATCGCTCCTATCAGGAATCTCGATAAGGAAGAAGGTCGCCGAGATGGTTGCAACGGGTCTCGGTGCAGCGTTCCT GAGCTACCTCTTCGGAAGGCTGATGGAGGCAGTGTTCCACGTTTCGGCACTTTAA
Upstream 100 bases:
>100_bases GAGGGAACTTCAGTGATTTCATATTGAAGAACGATCGGAATTCCTCAACCTTCCGATAGGCATTTTAACTTTTCTTCGGA TTTCTTACGGAGGTGGGCAA
Downstream 100 bases:
>100_bases ACTTCCTTCTCTTTGGATTTTCTCAGGCAATCACACCTTCACGTACTTCCACTTTCCACGCTTGAACACCAACCAGAAGA GTGCCGCTGTTGTGAAGGTC
Product: protein
Products: NA
Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Nodulin Protein; Transmembrane Protein; Rubrerythrin Subfamily Protein; Rubrerythrin Subfamily; Ferritin-Like Domain Fused
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDEMLKLAKEFYKDEYADSVLYAQLAKIEKDDEIRKEFLRLSNIESKHAKFWYDFITQHGGEVPKPSVKRLTIWSVKLLR KILGPGSVASLLEMGENSAIQKYFRYLTTYADRFTPEEMEQIKEVILDELEHEKFFYESKQRFHVENTRDLVLGMNDGLV EILGAVTGLSAVYPNNPQLVGISGLIVGVAGALSMAIGTFVSVRSQRQIKEAIRDRMEVLFRVSPEKAMEELIDKLTEGG MPEEVAKEVAKELANNSEAIMKLLIPEAEENEIRAALYTGISYLLGVAFPVTPYFLASSSLTALPFSILLAGSALAIVAT IISLLSGISIRKKVAEMVATGLGAAFLSYLFGRLMEAVFHVSAL
Sequences:
>Translated_364_residues MDEMLKLAKEFYKDEYADSVLYAQLAKIEKDDEIRKEFLRLSNIESKHAKFWYDFITQHGGEVPKPSVKRLTIWSVKLLR KILGPGSVASLLEMGENSAIQKYFRYLTTYADRFTPEEMEQIKEVILDELEHEKFFYESKQRFHVENTRDLVLGMNDGLV EILGAVTGLSAVYPNNPQLVGISGLIVGVAGALSMAIGTFVSVRSQRQIKEAIRDRMEVLFRVSPEKAMEELIDKLTEGG MPEEVAKEVAKELANNSEAIMKLLIPEAEENEIRAALYTGISYLLGVAFPVTPYFLASSSLTALPFSILLAGSALAIVAT IISLLSGISIRKKVAEMVATGLGAAFLSYLFGRLMEAVFHVSAL >Mature_364_residues MDEMLKLAKEFYKDEYADSVLYAQLAKIEKDDEIRKEFLRLSNIESKHAKFWYDFITQHGGEVPKPSVKRLTIWSVKLLR KILGPGSVASLLEMGENSAIQKYFRYLTTYADRFTPEEMEQIKEVILDELEHEKFFYESKQRFHVENTRDLVLGMNDGLV EILGAVTGLSAVYPNNPQLVGISGLIVGVAGALSMAIGTFVSVRSQRQIKEAIRDRMEVLFRVSPEKAMEELIDKLTEGG MPEEVAKEVAKELANNSEAIMKLLIPEAEENEIRAALYTGISYLLGVAFPVTPYFLASSSLTALPFSILLAGSALAIVAT IISLLSGISIRKKVAEMVATGLGAAFLSYLFGRLMEAVFHVSAL
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40503; Mature: 40503
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEMLKLAKEFYKDEYADSVLYAQLAKIEKDDEIRKEFLRLSNIESKHAKFWYDFITQHG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GEVPKPSVKRLTIWSVKLLRKILGPGSVASLLEMGENSAIQKYFRYLTTYADRFTPEEME CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH QIKEVILDELEHEKFFYESKQRFHVENTRDLVLGMNDGLVEILGAVTGLSAVYPNNPQLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEE GISGLIVGVAGALSMAIGTFVSVRSQRQIKEAIRDRMEVLFRVSPEKAMEELIDKLTEGG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC MPEEVAKEVAKELANNSEAIMKLLIPEAEENEIRAALYTGISYLLGVAFPVTPYFLASSS CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC LTALPFSILLAGSALAIVATIISLLSGISIRKKVAEMVATGLGAAFLSYLFGRLMEAVFH HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSAL HHCC >Mature Secondary Structure MDEMLKLAKEFYKDEYADSVLYAQLAKIEKDDEIRKEFLRLSNIESKHAKFWYDFITQHG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GEVPKPSVKRLTIWSVKLLRKILGPGSVASLLEMGENSAIQKYFRYLTTYADRFTPEEME CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH QIKEVILDELEHEKFFYESKQRFHVENTRDLVLGMNDGLVEILGAVTGLSAVYPNNPQLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEE GISGLIVGVAGALSMAIGTFVSVRSQRQIKEAIRDRMEVLFRVSPEKAMEELIDKLTEGG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC MPEEVAKEVAKELANNSEAIMKLLIPEAEENEIRAALYTGISYLLGVAFPVTPYFLASSS CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC LTALPFSILLAGSALAIVATIISLLSGISIRKKVAEMVATGLGAAFLSYLFGRLMEAVFH HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSAL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA