| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is rpl37ae [H]
Identifier: 212223601
GI number: 212223601
Start: 423866
End: 424126
Strand: Reverse
Name: rpl37ae [H]
Synonym: TON_0455
Alternate gene names: 212223601
Gene position: 424126-423866 (Counterclockwise)
Preceding gene: 212223609
Following gene: 212223600
Centisome position: 22.96
GC content: 60.54
Gene sequence:
>261_bases ATGGGAAGGACTACTAAGGTCGGTTCAGCCGGAAGGTTCGGTCCGAGGTACGGTCTCAAGATCAGAAGAAGGGTCGCGGC CGTTGAGGCCAAGATGAAGCAGAAGCACATCTGCCCGGTCTGCGGAAGGAAGGCGGTCAGAAGGATAAGTACCGGCATAT GGCAGTGCCAGAAGTGCGGTGCCACCTTTGCCGGCGGCGCCTACCTGCCGGTTACCCCGGCTGGAAAGGTCGCCAAGCGT GTTACGGCCTCCAAGGCCTGA
Upstream 100 bases:
>100_bases CATAAGCCCGCTCGGTGTCCAGGTATATGCAAAGGTTTATAAAACGTCCCCGGAAAAACCCTTCAGTCGTGAAAATTGCT GATAATTAGGGGTGATGCTC
Downstream 100 bases:
>100_bases CCCCTTTCCTTTGCTTAGTTTAGGGTGATAACTATGGTGATGGCCGTTTACCGCTGTGCGAAATGCGGAAAGGAGGTCGA GCTCGACCTCGAGAACACCA
Product: 50S ribosomal protein L37Ae
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MGRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPVTPAGKVAKR VTASKA
Sequences:
>Translated_86_residues MGRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPVTPAGKVAKR VTASKA >Mature_85_residues GRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPVTPAGKVAKRV TASKA
Specific function: Unknown
COG id: COG1997
COG function: function code J; Ribosomal protein L37AE/L43A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L37Ae family [H]
Homologues:
Organism=Homo sapiens, GI4506643, Length=72, Percent_Identity=40.2777777777778, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17535699, Length=67, Percent_Identity=43.2835820895522, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325300, Length=72, Percent_Identity=45.8333333333333, Blast_Score=67, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322554, Length=72, Percent_Identity=45.8333333333333, Blast_Score=67, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581863, Length=72, Percent_Identity=41.6666666666667, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864394, Length=72, Percent_Identity=41.6666666666667, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002674 - InterPro: IPR011331 - InterPro: IPR022945 - InterPro: IPR011332 [H]
Pfam domain/function: PF01780 Ribosomal_L37ae [H]
EC number: NA
Molecular weight: Translated: 9203; Mature: 9072
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC ATFAGGAYLPVTPAGKVAKRVTASKA CCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC ATFAGGAYLPVTPAGKVAKRVTASKA CCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA